No. words: 1478; after pruning: 1438


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.8 (1,1:722)  696  0.28 0.00 0.00  MoSU033F_F12_BE490219Sn31P024F10P015G071F1_086.ab1        7   723 (38)  C MoSU033R_F12_BE490219Sn31P024F10P015G071R1_086.ab1   (0)   717     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  354 nodes

 179 str. conn. components

Path
    1    MoSU033F_F12_BE490219Sn31P024F10P015G071F1_086.ab1     1 
   10  C MoSU033R_F12_BE490219Sn31P024F10P015G071R1_086.ab1   714 
   18    MoSU033F_F12_BE490219Sn31P024F10P015G071F1_086.ab1    18 
   42  C MoSU033R_F12_BE490219Sn31P024F10P015G071R1_086.ab1   682 
   46    MoSU033F_F12_BE490219Sn31P024F10P015G071F1_086.ab1    46 
   82  C MoSU033R_F12_BE490219Sn31P024F10P015G071R1_086.ab1   642 
   86    MoSU033F_F12_BE490219Sn31P024F10P015G071F1_086.ab1    86 
  137  C MoSU033R_F12_BE490219Sn31P024F10P015G071R1_086.ab1   587 
  241    MoSU033F_F12_BE490219Sn31P024F10P015G071F1_086.ab1   241 
  285  C MoSU033R_F12_BE490219Sn31P024F10P015G071R1_086.ab1   439 
  305    MoSU033F_F12_BE490219Sn31P024F10P015G071F1_086.ab1   305 
  313  C MoSU033R_F12_BE490219Sn31P024F10P015G071R1_086.ab1   411 
  337    MoSU033F_F12_BE490219Sn31P024F10P015G071F1_086.ab1   337 
  373  C MoSU033R_F12_BE490219Sn31P024F10P015G071R1_086.ab1   351 
  437    MoSU033F_F12_BE490219Sn31P024F10P015G071F1_086.ab1   437 
  485  C MoSU033R_F12_BE490219Sn31P024F10P015G071R1_086.ab1   239 
  561    MoSU033F_F12_BE490219Sn31P024F10P015G071F1_086.ab1   561 
  569  C MoSU033R_F12_BE490219Sn31P024F10P015G071R1_086.ab1   155 
  577    MoSU033F_F12_BE490219Sn31P024F10P015G071F1_086.ab1   577 
  581  C MoSU033R_F12_BE490219Sn31P024F10P015G071R1_086.ab1   143 
  589    MoSU033F_F12_BE490219Sn31P024F10P015G071F1_086.ab1   589 
  597  C MoSU033R_F12_BE490219Sn31P024F10P015G071R1_086.ab1   127 
  633    MoSU033F_F12_BE490219Sn31P024F10P015G071F1_086.ab1   633 
  637  C MoSU033R_F12_BE490219Sn31P024F10P015G071R1_086.ab1    87 
  669    MoSU033F_F12_BE490219Sn31P024F10P015G071F1_086.ab1   669 
  677  C MoSU033R_F12_BE490219Sn31P024F10P015G071R1_086.ab1    47 
  701    MoSU033F_F12_BE490219Sn31P024F10P015G071F1_086.ab1   701 
  705  C MoSU033R_F12_BE490219Sn31P024F10P015G071R1_086.ab1    19 
  709    MoSU033F_F12_BE490219Sn31P024F10P015G071F1_086.ab1   709 
  713  C MoSU033R_F12_BE490219Sn31P024F10P015G071R1_086.ab1    11 
  717    MoSU033F_F12_BE490219Sn31P024F10P015G071F1_086.ab1   717 
Contig length: old 761, new 761

Contig length: old 761, new 761
New start: 0