No. words: 1443; after pruning: 1417


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 14.0 (1,1:721)  666  0.00 0.00 0.00  MoSU033F_G12_BE490219Sn32P024F10P015G071F1_084.ab1       37   720 (37)  C MoSU033R_G12_BE490219Sn32P024F10P015G071R1_084.ab1   (0)   686     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  344 nodes

 174 str. conn. components

Path
    1    MoSU033F_G12_BE490219Sn32P024F10P015G071F1_084.ab1     1 
   40  C MoSU033R_G12_BE490219Sn32P024F10P015G071R1_084.ab1   683 
   48    MoSU033F_G12_BE490219Sn32P024F10P015G071F1_084.ab1    48 
   64  C MoSU033R_G12_BE490219Sn32P024F10P015G071R1_084.ab1   659 
   68    MoSU033F_G12_BE490219Sn32P024F10P015G071F1_084.ab1    68 
  100  C MoSU033R_G12_BE490219Sn32P024F10P015G071R1_084.ab1   623 
  104    MoSU033F_G12_BE490219Sn32P024F10P015G071F1_084.ab1   104 
  144  C MoSU033R_G12_BE490219Sn32P024F10P015G071R1_084.ab1   579 
  236    MoSU033F_G12_BE490219Sn32P024F10P015G071F1_084.ab1   236 
  548  C MoSU033R_G12_BE490219Sn32P024F10P015G071R1_084.ab1   175 
  560    MoSU033F_G12_BE490219Sn32P024F10P015G071F1_084.ab1   560 
  576  C MoSU033R_G12_BE490219Sn32P024F10P015G071R1_084.ab1   147 
  580    MoSU033F_G12_BE490219Sn32P024F10P015G071F1_084.ab1   580 
  616  C MoSU033R_G12_BE490219Sn32P024F10P015G071R1_084.ab1   107 
  624    MoSU033F_G12_BE490219Sn32P024F10P015G071F1_084.ab1   624 
  640  C MoSU033R_G12_BE490219Sn32P024F10P015G071R1_084.ab1    83 
  660    MoSU033F_G12_BE490219Sn32P024F10P015G071F1_084.ab1   660 
  664  C MoSU033R_G12_BE490219Sn32P024F10P015G071R1_084.ab1    59 
  672    MoSU033F_G12_BE490219Sn32P024F10P015G071F1_084.ab1   672 
  676  C MoSU033R_G12_BE490219Sn32P024F10P015G071R1_084.ab1    47 
  692    MoSU033F_G12_BE490219Sn32P024F10P015G071F1_084.ab1   692 
Contig length: old 757, new 757

Contig length: old 757, new 757
New start: 0