No. words: 1108; after pruning: 1068


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.7 (1,1:507)  474  0.20 0.79 0.00  MoSU033F_C02_BE490219Ta11P024C10P015G071F1_012.ab1        1   507 (51)  C MoSU033R_C02_BE490219Ta11P024C10P015G071R1_012.ab1   (39)   511     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C MoSU033R_C02_BE490219Ta11P024C10P015G071R1_012.ab1   550 
   99    MoSU033F_C02_BE490219Ta11P024C10P015G071F1_012.ab1    56 
  103  C MoSU033R_C02_BE490219Ta11P024C10P015G071R1_012.ab1   448 
  159    MoSU033F_C02_BE490219Ta11P024C10P015G071F1_012.ab1   116 
  316  C MoSU033R_C02_BE490219Ta11P024C10P015G071R1_012.ab1   235 
  348    MoSU033F_C02_BE490219Ta11P024C10P015G071F1_012.ab1   305 
  428  C MoSU033R_C02_BE490219Ta11P024C10P015G071R1_012.ab1   123 
  440    MoSU033F_C02_BE490219Ta11P024C10P015G071F1_012.ab1   397 
  448  C MoSU033R_C02_BE490219Ta11P024C10P015G071R1_012.ab1   103 
  456    MoSU033F_C02_BE490219Ta11P024C10P015G071F1_012.ab1   413 
  472  C MoSU033R_C02_BE490219Ta11P024C10P015G071R1_012.ab1    79 
  480    MoSU033F_C02_BE490219Ta11P024C10P015G071F1_012.ab1   437 
  496  C MoSU033R_C02_BE490219Ta11P024C10P015G071R1_012.ab1    55 
  500    MoSU033F_C02_BE490219Ta11P024C10P015G071F1_012.ab1   457 
Contig length: old 600, new 601

Contig length: old 601, new 601
New start: 0