No. words: 1320; after pruning: 1294


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:615)  599  0.00 0.00 0.00  MoSU033F_D05_BE490219Ta12P024E10P015G071F1_041.ab1        1   616 (41)  C MoSU033R_D05_BE490219Ta12P024E10P015G071R1_041.ab1   (47)   616     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  308 nodes

 156 str. conn. components

Path
    1  C MoSU033R_D05_BE490219Ta12P024E10P015G071R1_041.ab1   663 
  119    MoSU033F_D05_BE490219Ta12P024E10P015G071F1_041.ab1    72 
  123  C MoSU033R_D05_BE490219Ta12P024E10P015G071R1_041.ab1   541 
  135    MoSU033F_D05_BE490219Ta12P024E10P015G071F1_041.ab1    88 
  151  C MoSU033R_D05_BE490219Ta12P024E10P015G071R1_041.ab1   513 
  191    MoSU033F_D05_BE490219Ta12P024E10P015G071F1_041.ab1   144 
  287  C MoSU033R_D05_BE490219Ta12P024E10P015G071R1_041.ab1   377 
  303    MoSU033F_D05_BE490219Ta12P024E10P015G071F1_041.ab1   256 
  315  C MoSU033R_D05_BE490219Ta12P024E10P015G071R1_041.ab1   349 
  347    MoSU033F_D05_BE490219Ta12P024E10P015G071F1_041.ab1   300 
  355  C MoSU033R_D05_BE490219Ta12P024E10P015G071R1_041.ab1   309 
  375    MoSU033F_D05_BE490219Ta12P024E10P015G071F1_041.ab1   328 
  387  C MoSU033R_D05_BE490219Ta12P024E10P015G071R1_041.ab1   277 
  395    MoSU033F_D05_BE490219Ta12P024E10P015G071F1_041.ab1   348 
  431  C MoSU033R_D05_BE490219Ta12P024E10P015G071R1_041.ab1   233 
  495    MoSU033F_D05_BE490219Ta12P024E10P015G071F1_041.ab1   448 
  523  C MoSU033R_D05_BE490219Ta12P024E10P015G071R1_041.ab1   141 
  531    MoSU033F_D05_BE490219Ta12P024E10P015G071F1_041.ab1   484 
  543  C MoSU033R_D05_BE490219Ta12P024E10P015G071R1_041.ab1   121 
  555    MoSU033F_D05_BE490219Ta12P024E10P015G071F1_041.ab1   508 
  567  C MoSU033R_D05_BE490219Ta12P024E10P015G071R1_041.ab1    97 
  583    MoSU033F_D05_BE490219Ta12P024E10P015G071F1_041.ab1   536 
  587  C MoSU033R_D05_BE490219Ta12P024E10P015G071R1_041.ab1    77 
  603    MoSU033F_D05_BE490219Ta12P024E10P015G071F1_041.ab1   556 
  611  C MoSU033R_D05_BE490219Ta12P024E10P015G071R1_041.ab1    53 
  615    MoSU033F_D05_BE490219Ta12P024E10P015G071F1_041.ab1   568 
Contig length: old 704, new 704

Contig length: old 704, new 704
New start: 0