No. words: 1372; after pruning: 1346


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:736)  609  0.16 0.00 0.00  MoSU033F_B10_BE490219Ta12P024F10P015G071F1_078.ab1        1   628 (0)  C MoSU033R_B10_BE490219Ta12P024F10P015G071R1_078.ab1   (7)   737   110 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1  C MoSU033R_B10_BE490219Ta12P024F10P015G071R1_078.ab1   744 
   19    MoSU033F_B10_BE490219Ta12P024F10P015G071F1_078.ab1    12 
   32  C MoSU033R_B10_BE490219Ta12P024F10P015G071R1_078.ab1   713 
   36    MoSU033F_B10_BE490219Ta12P024F10P015G071F1_078.ab1    29 
   64  C MoSU033R_B10_BE490219Ta12P024F10P015G071R1_078.ab1   681 
   76    MoSU033F_B10_BE490219Ta12P024F10P015G071F1_078.ab1    69 
  100  C MoSU033R_B10_BE490219Ta12P024F10P015G071R1_078.ab1   645 
  108    MoSU033F_B10_BE490219Ta12P024F10P015G071F1_078.ab1   101 
  124  C MoSU033R_B10_BE490219Ta12P024F10P015G071R1_078.ab1   621 
  128    MoSU033F_B10_BE490219Ta12P024F10P015G071F1_078.ab1   121 
  156  C MoSU033R_B10_BE490219Ta12P024F10P015G071R1_078.ab1   589 
  172    MoSU033F_B10_BE490219Ta12P024F10P015G071F1_078.ab1   165 
  176  C MoSU033R_B10_BE490219Ta12P024F10P015G071R1_078.ab1   569 
  188    MoSU033F_B10_BE490219Ta12P024F10P015G071F1_078.ab1   181 
  196  C MoSU033R_B10_BE490219Ta12P024F10P015G071R1_078.ab1   549 
  208    MoSU033F_B10_BE490219Ta12P024F10P015G071F1_078.ab1   201 
  212  C MoSU033R_B10_BE490219Ta12P024F10P015G071R1_078.ab1   533 
  224    MoSU033F_B10_BE490219Ta12P024F10P015G071F1_078.ab1   217 
  236  C MoSU033R_B10_BE490219Ta12P024F10P015G071R1_078.ab1   509 
  264    MoSU033F_B10_BE490219Ta12P024F10P015G071F1_078.ab1   257 
  268  C MoSU033R_B10_BE490219Ta12P024F10P015G071R1_078.ab1   477 
  272    MoSU033F_B10_BE490219Ta12P024F10P015G071F1_078.ab1   265 
  276  C MoSU033R_B10_BE490219Ta12P024F10P015G071R1_078.ab1   469 
  280    MoSU033F_B10_BE490219Ta12P024F10P015G071F1_078.ab1   273 
  284  C MoSU033R_B10_BE490219Ta12P024F10P015G071R1_078.ab1   461 
Contig length: old 744, new 744

Contig length: old 744, new 744
New start: 0