No. words: 1109; after pruning: 1055


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    8    0.0 9.2 (1,1:507)  476  0.40 0.20 0.00  MoSU033F_E02_BE490219Ta13P024C10P015G071F1_008.ab1       10   508 (51)  C MoSU033R_E02_BE490219Ta13P024C10P015G071R1_008.ab1   (50)   500     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 8       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C MoSU033R_E02_BE490219Ta13P024C10P015G071R1_008.ab1   550 
   83    MoSU033F_E02_BE490219Ta13P024C10P015G071F1_008.ab1    41 
  130  C MoSU033R_E02_BE490219Ta13P024C10P015G071R1_008.ab1   421 
  154    MoSU033F_E02_BE490219Ta13P024C10P015G071F1_008.ab1   112 
  280  C MoSU033R_E02_BE490219Ta13P024C10P015G071R1_008.ab1   271 
  392    MoSU033F_E02_BE490219Ta13P024C10P015G071F1_008.ab1   350 
  400  C MoSU033R_E02_BE490219Ta13P024C10P015G071R1_008.ab1   151 
  404    MoSU033F_E02_BE490219Ta13P024C10P015G071F1_008.ab1   362 
  424  C MoSU033R_E02_BE490219Ta13P024C10P015G071R1_008.ab1   127 
  448    MoSU033F_E02_BE490219Ta13P024C10P015G071F1_008.ab1   406 
  468  C MoSU033R_E02_BE490219Ta13P024C10P015G071R1_008.ab1    83 
  492    MoSU033F_E02_BE490219Ta13P024C10P015G071F1_008.ab1   450 
Contig length: old 601, new 601

Contig length: old 601, new 601
New start: 0