No. words: 1322; after pruning: 1296


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:622)  603  0.16 0.00 0.00  MoSU033F_E05_BE490219Ta13P024E10P015G071F1_039.ab1        1   623 (40)  C MoSU033R_E05_BE490219Ta13P024E10P015G071R1_039.ab1   (36)   623     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1  C MoSU033R_E05_BE490219Ta13P024E10P015G071R1_039.ab1   659 
  608    MoSU033F_E05_BE490219Ta13P024E10P015G071F1_039.ab1   572 
  616  C MoSU033R_E05_BE490219Ta13P024E10P015G071R1_039.ab1    44 
  652    MoSU033F_E05_BE490219Ta13P024E10P015G071F1_039.ab1   616 
Contig length: old 699, new 699

Contig length: old 699, new 699
New start: 0