No. words: 1427; after pruning: 1401


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.2 (1,1:732)  654  0.29 0.15 0.15  MoSU033F_C10_BE490219Ta13P024F10P015G071F1_076.ab1        1   687 (0)  C MoSU033R_C10_BE490219Ta13P024F10P015G071R1_076.ab1   (7)   733    47 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  332 nodes

 168 str. conn. components

Path
    1  C MoSU033R_C10_BE490219Ta13P024F10P015G071R1_076.ab1   740 
   18    MoSU033F_C10_BE490219Ta13P024F10P015G071F1_076.ab1    10 
   32  C MoSU033R_C10_BE490219Ta13P024F10P015G071R1_076.ab1   709 
   36    MoSU033F_C10_BE490219Ta13P024F10P015G071F1_076.ab1    28 
   68  C MoSU033R_C10_BE490219Ta13P024F10P015G071R1_076.ab1   673 
   72    MoSU033F_C10_BE490219Ta13P024F10P015G071F1_076.ab1    64 
  128  C MoSU033R_C10_BE490219Ta13P024F10P015G071R1_076.ab1   613 
  132    MoSU033F_C10_BE490219Ta13P024F10P015G071F1_076.ab1   124 
  148  C MoSU033R_C10_BE490219Ta13P024F10P015G071R1_076.ab1   593 
  200    MoSU033F_C10_BE490219Ta13P024F10P015G071F1_076.ab1   192 
  208  C MoSU033R_C10_BE490219Ta13P024F10P015G071R1_076.ab1   533 
  220    MoSU033F_C10_BE490219Ta13P024F10P015G071F1_076.ab1   212 
  240  C MoSU033R_C10_BE490219Ta13P024F10P015G071R1_076.ab1   501 
  256    MoSU033F_C10_BE490219Ta13P024F10P015G071F1_076.ab1   248 
  264  C MoSU033R_C10_BE490219Ta13P024F10P015G071R1_076.ab1   477 
  272    MoSU033F_C10_BE490219Ta13P024F10P015G071F1_076.ab1   264 
  280  C MoSU033R_C10_BE490219Ta13P024F10P015G071R1_076.ab1   461 
  324    MoSU033F_C10_BE490219Ta13P024F10P015G071F1_076.ab1   316 
  336  C MoSU033R_C10_BE490219Ta13P024F10P015G071R1_076.ab1   405 
Contig length: old 740, new 740

Contig length: old 740, new 740
New start: 0