No. words: 1110; after pruning: 1056


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.3 (1,1:508)  478  0.39 0.59 0.00  MoSU033F_F02_BE490219Ta14P024C10P015G071F1_006.ab1        1   508 (52)  C MoSU033R_F02_BE490219Ta14P024C10P015G071R1_006.ab1   (39)   511     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C MoSU033R_F02_BE490219Ta14P024C10P015G071R1_006.ab1   550 
   91    MoSU033F_F02_BE490219Ta14P024C10P015G071F1_006.ab1    49 
  130  C MoSU033R_F02_BE490219Ta14P024C10P015G071R1_006.ab1   421 
  150    MoSU033F_F02_BE490219Ta14P024C10P015G071F1_006.ab1   108 
  344  C MoSU033R_F02_BE490219Ta14P024C10P015G071R1_006.ab1   207 
  348    MoSU033F_F02_BE490219Ta14P024C10P015G071F1_006.ab1   306 
  464  C MoSU033R_F02_BE490219Ta14P024C10P015G071R1_006.ab1    87 
  468    MoSU033F_F02_BE490219Ta14P024C10P015G071F1_006.ab1   426 
  472  C MoSU033R_F02_BE490219Ta14P024C10P015G071R1_006.ab1    79 
  488    MoSU033F_F02_BE490219Ta14P024C10P015G071F1_006.ab1   446 
Contig length: old 601, new 602

Contig length: old 602, new 602
New start: 0