No. words: 1417; after pruning: 1391


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.4 (1,1:733)  631  0.30 0.15 0.15  MoSU033F_D10_BE490219Ta14P024F10P015G071F1_074.ab1        1   662 (0)  C MoSU033R_D10_BE490219Ta14P024F10P015G071R1_074.ab1   (22)   733    72 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1  C MoSU033R_D10_BE490219Ta14P024F10P015G071R1_074.ab1   755 
   26    MoSU033F_D10_BE490219Ta14P024F10P015G071F1_074.ab1     4 
   30  C MoSU033R_D10_BE490219Ta14P024F10P015G071R1_074.ab1   726 
   34    MoSU033F_D10_BE490219Ta14P024F10P015G071F1_074.ab1    12 
   86  C MoSU033R_D10_BE490219Ta14P024F10P015G071R1_074.ab1   670 
   90    MoSU033F_D10_BE490219Ta14P024F10P015G071F1_074.ab1    68 
  118  C MoSU033R_D10_BE490219Ta14P024F10P015G071R1_074.ab1   638 
  122    MoSU033F_D10_BE490219Ta14P024F10P015G071F1_074.ab1   100 
  182  C MoSU033R_D10_BE490219Ta14P024F10P015G071R1_074.ab1   574 
  190    MoSU033F_D10_BE490219Ta14P024F10P015G071F1_074.ab1   168 
  206  C MoSU033R_D10_BE490219Ta14P024F10P015G071R1_074.ab1   550 
  210    MoSU033F_D10_BE490219Ta14P024F10P015G071F1_074.ab1   188 
  226  C MoSU033R_D10_BE490219Ta14P024F10P015G071R1_074.ab1   530 
  234    MoSU033F_D10_BE490219Ta14P024F10P015G071F1_074.ab1   212 
  242  C MoSU033R_D10_BE490219Ta14P024F10P015G071R1_074.ab1   514 
  246    MoSU033F_D10_BE490219Ta14P024F10P015G071F1_074.ab1   224 
  258  C MoSU033R_D10_BE490219Ta14P024F10P015G071R1_074.ab1   498 
  270    MoSU033F_D10_BE490219Ta14P024F10P015G071F1_074.ab1   248 
  302  C MoSU033R_D10_BE490219Ta14P024F10P015G071R1_074.ab1   454 
  310    MoSU033F_D10_BE490219Ta14P024F10P015G071F1_074.ab1   288 
  322  C MoSU033R_D10_BE490219Ta14P024F10P015G071R1_074.ab1   434 
  338    MoSU033F_D10_BE490219Ta14P024F10P015G071F1_074.ab1   316 
  350  C MoSU033R_D10_BE490219Ta14P024F10P015G071R1_074.ab1   406 
  374    MoSU033F_D10_BE490219Ta14P024F10P015G071F1_074.ab1   352 
  386  C MoSU033R_D10_BE490219Ta14P024F10P015G071R1_074.ab1   370 
  394    MoSU033F_D10_BE490219Ta14P024F10P015G071F1_074.ab1   372 
  398  C MoSU033R_D10_BE490219Ta14P024F10P015G071R1_074.ab1   358 
  434    MoSU033F_D10_BE490219Ta14P024F10P015G071F1_074.ab1   412 
  438  C MoSU033R_D10_BE490219Ta14P024F10P015G071R1_074.ab1   318 
  442    MoSU033F_D10_BE490219Ta14P024F10P015G071F1_074.ab1   420 
  446  C MoSU033R_D10_BE490219Ta14P024F10P015G071R1_074.ab1   310 
  462    MoSU033F_D10_BE490219Ta14P024F10P015G071F1_074.ab1   440 
  478  C MoSU033R_D10_BE490219Ta14P024F10P015G071R1_074.ab1   278 
  518    MoSU033F_D10_BE490219Ta14P024F10P015G071F1_074.ab1   496 
  522  C MoSU033R_D10_BE490219Ta14P024F10P015G071R1_074.ab1   234 
Contig length: old 755, new 755

Contig length: old 755, new 755
New start: 0