No. words: 1320; after pruning: 1294


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.4 (1,1:612)  591  0.33 0.00 0.00  MoSU033F_G05_BE490219Ta15P024E10P015G071F1_035.ab1        1   613 (44)  C MoSU033R_G05_BE490219Ta15P024E10P015G071R1_035.ab1   (50)   613     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1  C MoSU033R_G05_BE490219Ta15P024E10P015G071R1_035.ab1   663 
  191    MoSU033F_G05_BE490219Ta15P024E10P015G071F1_035.ab1   141 
  199  C MoSU033R_G05_BE490219Ta15P024E10P015G071R1_035.ab1   465 
  243    MoSU033F_G05_BE490219Ta15P024E10P015G071F1_035.ab1   193 
  247  C MoSU033R_G05_BE490219Ta15P024E10P015G071R1_035.ab1   417 
  251    MoSU033F_G05_BE490219Ta15P024E10P015G071F1_035.ab1   201 
  314  C MoSU033R_G05_BE490219Ta15P024E10P015G071R1_035.ab1   350 
  322    MoSU033F_G05_BE490219Ta15P024E10P015G071F1_035.ab1   272 
  430  C MoSU033R_G05_BE490219Ta15P024E10P015G071R1_035.ab1   234 
  438    MoSU033F_G05_BE490219Ta15P024E10P015G071F1_035.ab1   388 
  462  C MoSU033R_G05_BE490219Ta15P024E10P015G071R1_035.ab1   202 
  466    MoSU033F_G05_BE490219Ta15P024E10P015G071F1_035.ab1   416 
  514  C MoSU033R_G05_BE490219Ta15P024E10P015G071R1_035.ab1   150 
  526    MoSU033F_G05_BE490219Ta15P024E10P015G071F1_035.ab1   476 
  546  C MoSU033R_G05_BE490219Ta15P024E10P015G071R1_035.ab1   118 
  554    MoSU033F_G05_BE490219Ta15P024E10P015G071F1_035.ab1   504 
  558  C MoSU033R_G05_BE490219Ta15P024E10P015G071R1_035.ab1   106 
  574    MoSU033F_G05_BE490219Ta15P024E10P015G071F1_035.ab1   524 
  590  C MoSU033R_G05_BE490219Ta15P024E10P015G071R1_035.ab1    74 
  594    MoSU033F_G05_BE490219Ta15P024E10P015G071F1_035.ab1   544 
  610  C MoSU033R_G05_BE490219Ta15P024E10P015G071R1_035.ab1    54 
  614    MoSU033F_G05_BE490219Ta15P024E10P015G071F1_035.ab1   564 
  622  C MoSU033R_G05_BE490219Ta15P024E10P015G071R1_035.ab1    42 
  630    MoSU033F_G05_BE490219Ta15P024E10P015G071F1_035.ab1   580 
Contig length: old 707, new 707

Contig length: old 707, new 707
New start: 0