No. words: 1332; after pruning: 1306


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.4 (1,1:636)  612  0.16 0.00 0.16  MoSU033F_H05_BE490219Ta16P024E10P015G071F1_033.ab1        1   637 (19)  C MoSU033R_H05_BE490219Ta16P024E10P015G071R1_033.ab1   (40)   636     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1  C MoSU033R_H05_BE490219Ta16P024E10P015G071R1_033.ab1   676 
  120    MoSU033F_H05_BE490219Ta16P024E10P015G071F1_033.ab1    80 
  124  C MoSU033R_H05_BE490219Ta16P024E10P015G071R1_033.ab1   553 
  128    MoSU033F_H05_BE490219Ta16P024E10P015G071F1_033.ab1    88 
  156  C MoSU033R_H05_BE490219Ta16P024E10P015G071R1_033.ab1   521 
  180    MoSU033F_H05_BE490219Ta16P024E10P015G071F1_033.ab1   140 
  184  C MoSU033R_H05_BE490219Ta16P024E10P015G071R1_033.ab1   493 
  244    MoSU033F_H05_BE490219Ta16P024E10P015G071F1_033.ab1   204 
  264  C MoSU033R_H05_BE490219Ta16P024E10P015G071R1_033.ab1   413 
  284    MoSU033F_H05_BE490219Ta16P024E10P015G071F1_033.ab1   244 
  296  C MoSU033R_H05_BE490219Ta16P024E10P015G071R1_033.ab1   381 
  324    MoSU033F_H05_BE490219Ta16P024E10P015G071F1_033.ab1   284 
  348  C MoSU033R_H05_BE490219Ta16P024E10P015G071R1_033.ab1   329 
  360    MoSU033F_H05_BE490219Ta16P024E10P015G071F1_033.ab1   320 
  364  C MoSU033R_H05_BE490219Ta16P024E10P015G071R1_033.ab1   313 
  368    MoSU033F_H05_BE490219Ta16P024E10P015G071F1_033.ab1   328 
  384  C MoSU033R_H05_BE490219Ta16P024E10P015G071R1_033.ab1   293 
  396    MoSU033F_H05_BE490219Ta16P024E10P015G071F1_033.ab1   356 
  400  C MoSU033R_H05_BE490219Ta16P024E10P015G071R1_033.ab1   277 
  408    MoSU033F_H05_BE490219Ta16P024E10P015G071F1_033.ab1   368 
  416  C MoSU033R_H05_BE490219Ta16P024E10P015G071R1_033.ab1   261 
  420    MoSU033F_H05_BE490219Ta16P024E10P015G071F1_033.ab1   380 
  424  C MoSU033R_H05_BE490219Ta16P024E10P015G071R1_033.ab1   253 
  428    MoSU033F_H05_BE490219Ta16P024E10P015G071F1_033.ab1   388 
  432  C MoSU033R_H05_BE490219Ta16P024E10P015G071R1_033.ab1   245 
  464    MoSU033F_H05_BE490219Ta16P024E10P015G071F1_033.ab1   424 
  468  C MoSU033R_H05_BE490219Ta16P024E10P015G071R1_033.ab1   209 
  472    MoSU033F_H05_BE490219Ta16P024E10P015G071F1_033.ab1   432 
  480  C MoSU033R_H05_BE490219Ta16P024E10P015G071R1_033.ab1   197 
  496    MoSU033F_H05_BE490219Ta16P024E10P015G071F1_033.ab1   456 
  500  C MoSU033R_H05_BE490219Ta16P024E10P015G071R1_033.ab1   177 
  508    MoSU033F_H05_BE490219Ta16P024E10P015G071F1_033.ab1   468 
  512  C MoSU033R_H05_BE490219Ta16P024E10P015G071R1_033.ab1   165 
  628    MoSU033F_H05_BE490219Ta16P024E10P015G071F1_033.ab1   588 
  636  C MoSU033R_H05_BE490219Ta16P024E10P015G071R1_033.ab1    41 
  667    MoSU033F_H05_BE490219Ta16P024E10P015G071F1_033.ab1   627 
Contig length: old 695, new 696

Contig length: old 696, new 696
New start: 0