No. words: 1485; after pruning: 1459


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.9 (1,1:731)  698  0.00 0.00 0.00  MoSU033F_F10_BE490219Ta16P024F10P015G071F1_070.ab1       18   732 (38)  C MoSU033R_F10_BE490219Ta16P024F10P015G071R1_070.ab1   (0)   715     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  358 nodes

 181 str. conn. components

Path
    1    MoSU033F_F10_BE490219Ta16P024F10P015G071F1_070.ab1     1 
   21  C MoSU033R_F10_BE490219Ta16P024F10P015G071R1_070.ab1   712 
   25    MoSU033F_F10_BE490219Ta16P024F10P015G071F1_070.ab1    25 
   61  C MoSU033R_F10_BE490219Ta16P024F10P015G071R1_070.ab1   672 
   65    MoSU033F_F10_BE490219Ta16P024F10P015G071F1_070.ab1    65 
  101  C MoSU033R_F10_BE490219Ta16P024F10P015G071R1_070.ab1   632 
  105    MoSU033F_F10_BE490219Ta16P024F10P015G071F1_070.ab1   105 
  109  C MoSU033R_F10_BE490219Ta16P024F10P015G071R1_070.ab1   624 
  113    MoSU033F_F10_BE490219Ta16P024F10P015G071F1_070.ab1   113 
  157  C MoSU033R_F10_BE490219Ta16P024F10P015G071R1_070.ab1   576 
  221    MoSU033F_F10_BE490219Ta16P024F10P015G071F1_070.ab1   221 
  233  C MoSU033R_F10_BE490219Ta16P024F10P015G071R1_070.ab1   500 
  249    MoSU033F_F10_BE490219Ta16P024F10P015G071F1_070.ab1   249 
  269  C MoSU033R_F10_BE490219Ta16P024F10P015G071R1_070.ab1   464 
  273    MoSU033F_F10_BE490219Ta16P024F10P015G071F1_070.ab1   273 
  301  C MoSU033R_F10_BE490219Ta16P024F10P015G071R1_070.ab1   432 
  313    MoSU033F_F10_BE490219Ta16P024F10P015G071F1_070.ab1   313 
  341  C MoSU033R_F10_BE490219Ta16P024F10P015G071R1_070.ab1   392 
  345    MoSU033F_F10_BE490219Ta16P024F10P015G071F1_070.ab1   345 
  389  C MoSU033R_F10_BE490219Ta16P024F10P015G071R1_070.ab1   344 
  393    MoSU033F_F10_BE490219Ta16P024F10P015G071F1_070.ab1   393 
  457  C MoSU033R_F10_BE490219Ta16P024F10P015G071R1_070.ab1   276 
  465    MoSU033F_F10_BE490219Ta16P024F10P015G071F1_070.ab1   465 
  473  C MoSU033R_F10_BE490219Ta16P024F10P015G071R1_070.ab1   260 
  493    MoSU033F_F10_BE490219Ta16P024F10P015G071F1_070.ab1   493 
  501  C MoSU033R_F10_BE490219Ta16P024F10P015G071R1_070.ab1   232 
  629    MoSU033F_F10_BE490219Ta16P024F10P015G071F1_070.ab1   629 
  633  C MoSU033R_F10_BE490219Ta16P024F10P015G071R1_070.ab1   100 
  701    MoSU033F_F10_BE490219Ta16P024F10P015G071F1_070.ab1   701 
  709  C MoSU033R_F10_BE490219Ta16P024F10P015G071R1_070.ab1    24 
  725    MoSU033F_F10_BE490219Ta16P024F10P015G071F1_070.ab1   725 
Contig length: old 770, new 770

Contig length: old 770, new 770
New start: 0