No. words: 1098; after pruning: 1058


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.4 (1,1:512)  487  0.20 0.39 0.00  MoSU033F_A03_BE490219Ta17P024C10P015G071F1_031.ab1        1   512 (39)  C MoSU033R_A03_BE490219Ta17P024C10P015G071R1_031.ab1   (33)   514     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  248 nodes

 126 str. conn. components

Path
    1  C MoSU033R_A03_BE490219Ta17P024C10P015G071R1_031.ab1   547 
   91    MoSU033F_A03_BE490219Ta17P024C10P015G071F1_031.ab1    56 
   99  C MoSU033R_A03_BE490219Ta17P024C10P015G071R1_031.ab1   449 
  151    MoSU033F_A03_BE490219Ta17P024C10P015G071F1_031.ab1   116 
  167  C MoSU033R_A03_BE490219Ta17P024C10P015G071R1_031.ab1   381 
  171    MoSU033F_A03_BE490219Ta17P024C10P015G071F1_031.ab1   136 
  310  C MoSU033R_A03_BE490219Ta17P024C10P015G071R1_031.ab1   238 
  390    MoSU033F_A03_BE490219Ta17P024C10P015G071F1_031.ab1   355 
Contig length: old 585, new 586

Contig length: old 586, new 586
New start: 0