No. words: 1468; after pruning: 1442


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.3 (1,1:732)  698  0.68 0.00 0.00  MoSU033F_G10_BE490219Ta17P024F10P015G071F1_068.ab1        1   731 (0)  C MoSU033R_G10_BE490219Ta17P024F10P015G071R1_068.ab1   (4)   733     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  354 nodes

 179 str. conn. components

Path
    1  C MoSU033R_G10_BE490219Ta17P024F10P015G071R1_068.ab1   737 
   16    MoSU033F_G10_BE490219Ta17P024F10P015G071F1_068.ab1    12 
   25  C MoSU033R_G10_BE490219Ta17P024F10P015G071R1_068.ab1   713 
   29    MoSU033F_G10_BE490219Ta17P024F10P015G071F1_068.ab1    25 
  161  C MoSU033R_G10_BE490219Ta17P024F10P015G071R1_068.ab1   577 
  169    MoSU033F_G10_BE490219Ta17P024F10P015G071F1_068.ab1   165 
  237  C MoSU033R_G10_BE490219Ta17P024F10P015G071R1_068.ab1   501 
  249    MoSU033F_G10_BE490219Ta17P024F10P015G071F1_068.ab1   245 
  301  C MoSU033R_G10_BE490219Ta17P024F10P015G071R1_068.ab1   437 
  313    MoSU033F_G10_BE490219Ta17P024F10P015G071F1_068.ab1   309 
  341  C MoSU033R_G10_BE490219Ta17P024F10P015G071R1_068.ab1   397 
  345    MoSU033F_G10_BE490219Ta17P024F10P015G071F1_068.ab1   341 
  377  C MoSU033R_G10_BE490219Ta17P024F10P015G071R1_068.ab1   361 
  393    MoSU033F_G10_BE490219Ta17P024F10P015G071F1_068.ab1   389 
  453  C MoSU033R_G10_BE490219Ta17P024F10P015G071R1_068.ab1   285 
  501    MoSU033F_G10_BE490219Ta17P024F10P015G071F1_068.ab1   497 
  509  C MoSU033R_G10_BE490219Ta17P024F10P015G071R1_068.ab1   229 
  537    MoSU033F_G10_BE490219Ta17P024F10P015G071F1_068.ab1   533 
  541  C MoSU033R_G10_BE490219Ta17P024F10P015G071R1_068.ab1   197 
  553    MoSU033F_G10_BE490219Ta17P024F10P015G071F1_068.ab1   549 
  565  C MoSU033R_G10_BE490219Ta17P024F10P015G071R1_068.ab1   173 
Contig length: old 737, new 737

Contig length: old 737, new 737
New start: 0