No. words: 1110; after pruning: 1070


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.5 (1,1:511)  486  0.20 0.39 0.00  MoSU033F_B03_BE490219Ta18P024C10P015G071F1_029.ab1        1   511 (50)  C MoSU033R_B03_BE490219Ta18P024C10P015G071R1_029.ab1   (36)   513     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  248 nodes

 126 str. conn. components

Path
    1  C MoSU033R_B03_BE490219Ta18P024C10P015G071R1_029.ab1   549 
   98    MoSU033F_B03_BE490219Ta18P024C10P015G071F1_029.ab1    60 
  102  C MoSU033R_B03_BE490219Ta18P024C10P015G071R1_029.ab1   448 
  158    MoSU033F_B03_BE490219Ta18P024C10P015G071F1_029.ab1   120 
  315  C MoSU033R_B03_BE490219Ta18P024C10P015G071R1_029.ab1   235 
  391    MoSU033F_B03_BE490219Ta18P024C10P015G071F1_029.ab1   353 
  463  C MoSU033R_B03_BE490219Ta18P024C10P015G071R1_029.ab1    87 
  467    MoSU033F_B03_BE490219Ta18P024C10P015G071F1_029.ab1   429 
  471  C MoSU033R_B03_BE490219Ta18P024C10P015G071R1_029.ab1    79 
  491    MoSU033F_B03_BE490219Ta18P024C10P015G071F1_029.ab1   453 
Contig length: old 598, new 599

Contig length: old 599, new 599
New start: 0