No. words: 1319; after pruning: 1293


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.6 (1,1:613)  597  0.00 0.00 0.00  MoSU033F_B06_BE490219Ta18P024E10P015G071F1_046.ab1        1   614 (41)  C MoSU033R_B06_BE490219Ta18P024E10P015G071R1_046.ab1   (50)   614     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  308 nodes

 156 str. conn. components

Path
    1  C MoSU033R_B06_BE490219Ta18P024E10P015G071R1_046.ab1   664 
  118    MoSU033F_B06_BE490219Ta18P024E10P015G071F1_046.ab1    68 
  122  C MoSU033R_B06_BE490219Ta18P024E10P015G071R1_046.ab1   543 
  194    MoSU033F_B06_BE490219Ta18P024E10P015G071F1_046.ab1   144 
  214  C MoSU033R_B06_BE490219Ta18P024E10P015G071R1_046.ab1   451 
  302    MoSU033F_B06_BE490219Ta18P024E10P015G071F1_046.ab1   252 
  318  C MoSU033R_B06_BE490219Ta18P024E10P015G071R1_046.ab1   347 
  354    MoSU033F_B06_BE490219Ta18P024E10P015G071F1_046.ab1   304 
  398  C MoSU033R_B06_BE490219Ta18P024E10P015G071R1_046.ab1   267 
  406    MoSU033F_B06_BE490219Ta18P024E10P015G071F1_046.ab1   356 
  410  C MoSU033R_B06_BE490219Ta18P024E10P015G071R1_046.ab1   255 
  426    MoSU033F_B06_BE490219Ta18P024E10P015G071F1_046.ab1   376 
  430  C MoSU033R_B06_BE490219Ta18P024E10P015G071R1_046.ab1   235 
  490    MoSU033F_B06_BE490219Ta18P024E10P015G071F1_046.ab1   440 
  522  C MoSU033R_B06_BE490219Ta18P024E10P015G071R1_046.ab1   143 
  562    MoSU033F_B06_BE490219Ta18P024E10P015G071F1_046.ab1   512 
  582  C MoSU033R_B06_BE490219Ta18P024E10P015G071R1_046.ab1    83 
  606    MoSU033F_B06_BE490219Ta18P024E10P015G071F1_046.ab1   556 
  610  C MoSU033R_B06_BE490219Ta18P024E10P015G071R1_046.ab1    55 
  614    MoSU033F_B06_BE490219Ta18P024E10P015G071F1_046.ab1   564 
  622  C MoSU033R_B06_BE490219Ta18P024E10P015G071R1_046.ab1    43 
  630    MoSU033F_B06_BE490219Ta18P024E10P015G071F1_046.ab1   580 
  634  C MoSU033R_B06_BE490219Ta18P024E10P015G071R1_046.ab1    31 
  638    MoSU033F_B06_BE490219Ta18P024E10P015G071F1_046.ab1   588 
Contig length: old 705, new 705

Contig length: old 705, new 705
New start: 0