No. words: 1326; after pruning: 1286


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.4 (1,1:743)  554  0.35 0.17 0.00  MoSU033F_H10_BE490219Ta18P024F10P015G071F1_066.ab1        1   574 (0)  C MoSU033R_H10_BE490219Ta18P024F10P015G071R1_066.ab1   (7)   745   171 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  278 nodes

 141 str. conn. components

Path
    1  C MoSU033R_H10_BE490219Ta18P024F10P015G071R1_066.ab1   752 
   28    MoSU033F_H10_BE490219Ta18P024F10P015G071F1_066.ab1    20 
   76  C MoSU033R_H10_BE490219Ta18P024F10P015G071R1_066.ab1   677 
   84    MoSU033F_H10_BE490219Ta18P024F10P015G071F1_066.ab1    76 
  100  C MoSU033R_H10_BE490219Ta18P024F10P015G071R1_066.ab1   653 
  112    MoSU033F_H10_BE490219Ta18P024F10P015G071F1_066.ab1   104 
  116  C MoSU033R_H10_BE490219Ta18P024F10P015G071R1_066.ab1   637 
  124    MoSU033F_H10_BE490219Ta18P024F10P015G071F1_066.ab1   116 
  192  C MoSU033R_H10_BE490219Ta18P024F10P015G071R1_066.ab1   561 
  196    MoSU033F_H10_BE490219Ta18P024F10P015G071F1_066.ab1   188 
  208  C MoSU033R_H10_BE490219Ta18P024F10P015G071R1_066.ab1   545 
  216    MoSU033F_H10_BE490219Ta18P024F10P015G071F1_066.ab1   208 
  220  C MoSU033R_H10_BE490219Ta18P024F10P015G071R1_066.ab1   533 
  228    MoSU033F_H10_BE490219Ta18P024F10P015G071F1_066.ab1   220 
  306  C MoSU033R_H10_BE490219Ta18P024F10P015G071R1_066.ab1   447 
  310    MoSU033F_H10_BE490219Ta18P024F10P015G071F1_066.ab1   302 
  346  C MoSU033R_H10_BE490219Ta18P024F10P015G071R1_066.ab1   407 
  350    MoSU033F_H10_BE490219Ta18P024F10P015G071F1_066.ab1   342 
  366  C MoSU033R_H10_BE490219Ta18P024F10P015G071R1_066.ab1   387 
  378    MoSU033F_H10_BE490219Ta18P024F10P015G071F1_066.ab1   370 
  398  C MoSU033R_H10_BE490219Ta18P024F10P015G071R1_066.ab1   355 
  418    MoSU033F_H10_BE490219Ta18P024F10P015G071F1_066.ab1   410 
  434  C MoSU033R_H10_BE490219Ta18P024F10P015G071R1_066.ab1   319 
  446    MoSU033F_H10_BE490219Ta18P024F10P015G071F1_066.ab1   438 
  450  C MoSU033R_H10_BE490219Ta18P024F10P015G071R1_066.ab1   303 
Contig length: old 752, new 752

Contig length: old 752, new 752
New start: 0 
S Change at: 24; seg lengths: entry 1, contig 1