No. words: 1313; after pruning: 1273


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.4 (1,1:613)  587  0.33 0.00 0.16  MoSU033F_C06_BE490219Ta19P024E10P015G071F1_044.ab1        1   614 (39)  C MoSU033R_C06_BE490219Ta19P024E10P015G071R1_044.ab1   (47)   613     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  300 nodes

 152 str. conn. components

Path
    1  C MoSU033R_C06_BE490219Ta19P024E10P015G071R1_044.ab1   660 
  219    MoSU033F_C06_BE490219Ta19P024E10P015G071F1_044.ab1   172 
  427  C MoSU033R_C06_BE490219Ta19P024E10P015G071R1_044.ab1   234 
  612    MoSU033F_C06_BE490219Ta19P024E10P015G071F1_044.ab1   566 
  616  C MoSU033R_C06_BE490219Ta19P024E10P015G071R1_044.ab1    45 
  640    MoSU033F_C06_BE490219Ta19P024E10P015G071F1_044.ab1   594 
  644  C MoSU033R_C06_BE490219Ta19P024E10P015G071R1_044.ab1    17 
  648    MoSU033F_C06_BE490219Ta19P024E10P015G071F1_044.ab1   602 
Contig length: old 699, new 699

Contig length: old 699, new 699
New start: 0