No. words: 1513; after pruning: 1487


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.1 (1,1:733)  709  0.27 0.00 0.00  MoSU033F_A11_BE490219Ta19P024F10P015G071F1_095.ab1        1   734 (38)  C MoSU033R_A11_BE490219Ta19P024F10P015G071R1_095.ab1   (7)   734     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  362 nodes

 183 str. conn. components

Path
    1  C MoSU033R_A11_BE490219Ta19P024F10P015G071R1_095.ab1   741 
   19    MoSU033F_A11_BE490219Ta19P024F10P015G071F1_095.ab1    12 
   60  C MoSU033R_A11_BE490219Ta19P024F10P015G071R1_095.ab1   682 
   64    MoSU033F_A11_BE490219Ta19P024F10P015G071F1_095.ab1    57 
  160  C MoSU033R_A11_BE490219Ta19P024F10P015G071R1_095.ab1   582 
  228    MoSU033F_A11_BE490219Ta19P024F10P015G071F1_095.ab1   221 
  240  C MoSU033R_A11_BE490219Ta19P024F10P015G071R1_095.ab1   502 
  256    MoSU033F_A11_BE490219Ta19P024F10P015G071F1_095.ab1   249 
  336  C MoSU033R_A11_BE490219Ta19P024F10P015G071R1_095.ab1   406 
  468    MoSU033F_A11_BE490219Ta19P024F10P015G071F1_095.ab1   461 
  472  C MoSU033R_A11_BE490219Ta19P024F10P015G071R1_095.ab1   270 
  580    MoSU033F_A11_BE490219Ta19P024F10P015G071F1_095.ab1   573 
  596  C MoSU033R_A11_BE490219Ta19P024F10P015G071R1_095.ab1   146 
  628    MoSU033F_A11_BE490219Ta19P024F10P015G071F1_095.ab1   621 
  636  C MoSU033R_A11_BE490219Ta19P024F10P015G071R1_095.ab1   106 
  711    MoSU033F_A11_BE490219Ta19P024F10P015G071F1_095.ab1   704 
  715  C MoSU033R_A11_BE490219Ta19P024F10P015G071R1_095.ab1    27 
  727    MoSU033F_A11_BE490219Ta19P024F10P015G071F1_095.ab1   720 
Contig length: old 779, new 779

Contig length: old 779, new 779
New start: 0