No. words: 1106; after pruning: 1066


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 5.9 (1,1:511)  476  0.20 0.40 0.00  MoSU033F_D03_BE490219Ta20P024C10P015G071F1_025.ab1        9   511 (44)  C MoSU033R_D03_BE490219Ta20P024C10P015G071R1_025.ab1   (46)   505     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C MoSU033R_D03_BE490219Ta20P024C10P015G071R1_025.ab1   551 
   83    MoSU033F_D03_BE490219Ta20P024C10P015G071F1_025.ab1    43 
  131  C MoSU033R_D03_BE490219Ta20P024C10P015G071R1_025.ab1   421 
  139    MoSU033F_D03_BE490219Ta20P024C10P015G071F1_025.ab1    99 
  143  C MoSU033R_D03_BE490219Ta20P024C10P015G071R1_025.ab1   409 
  147    MoSU033F_D03_BE490219Ta20P024C10P015G071F1_025.ab1   107 
  236  C MoSU033R_D03_BE490219Ta20P024C10P015G071R1_025.ab1   316 
  240    MoSU033F_D03_BE490219Ta20P024C10P015G071F1_025.ab1   200 
  316  C MoSU033R_D03_BE490219Ta20P024C10P015G071R1_025.ab1   236 
  336    MoSU033F_D03_BE490219Ta20P024C10P015G071F1_025.ab1   296 
  404  C MoSU033R_D03_BE490219Ta20P024C10P015G071R1_025.ab1   148 
  416    MoSU033F_D03_BE490219Ta20P024C10P015G071F1_025.ab1   376 
  424  C MoSU033R_D03_BE490219Ta20P024C10P015G071R1_025.ab1   128 
  444    MoSU033F_D03_BE490219Ta20P024C10P015G071F1_025.ab1   404 
  452  C MoSU033R_D03_BE490219Ta20P024C10P015G071R1_025.ab1   100 
  456    MoSU033F_D03_BE490219Ta20P024C10P015G071F1_025.ab1   416 
  460  C MoSU033R_D03_BE490219Ta20P024C10P015G071R1_025.ab1    92 
  484    MoSU033F_D03_BE490219Ta20P024C10P015G071F1_025.ab1   444 
Contig length: old 594, new 595

Contig length: old 595, new 595
New start: 0