No. words: 1488; after pruning: 1448


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.9 (1,1:718)  700  0.14 0.00 0.00  MoSU033F_B11_BE490219Ta20P024F10P015G071F1_093.ab1        1   719 (30)  C MoSU033R_B11_BE490219Ta20P024F10P015G071R1_093.ab1   (20)   719     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  356 nodes

 180 str. conn. components

Path
    1  C MoSU033R_B11_BE490219Ta20P024F10P015G071R1_093.ab1   739 
   25    MoSU033F_B11_BE490219Ta20P024F10P015G071F1_093.ab1     5 
   29  C MoSU033R_B11_BE490219Ta20P024F10P015G071R1_093.ab1   711 
   37    MoSU033F_B11_BE490219Ta20P024F10P015G071F1_093.ab1    17 
  188  C MoSU033R_B11_BE490219Ta20P024F10P015G071R1_093.ab1   552 
  200    MoSU033F_B11_BE490219Ta20P024F10P015G071F1_093.ab1   180 
  216  C MoSU033R_B11_BE490219Ta20P024F10P015G071R1_093.ab1   524 
  220    MoSU033F_B11_BE490219Ta20P024F10P015G071F1_093.ab1   200 
  256  C MoSU033R_B11_BE490219Ta20P024F10P015G071R1_093.ab1   484 
  260    MoSU033F_B11_BE490219Ta20P024F10P015G071F1_093.ab1   240 
  276  C MoSU033R_B11_BE490219Ta20P024F10P015G071R1_093.ab1   464 
  292    MoSU033F_B11_BE490219Ta20P024F10P015G071F1_093.ab1   272 
  304  C MoSU033R_B11_BE490219Ta20P024F10P015G071R1_093.ab1   436 
  312    MoSU033F_B11_BE490219Ta20P024F10P015G071F1_093.ab1   292 
  344  C MoSU033R_B11_BE490219Ta20P024F10P015G071R1_093.ab1   396 
  356    MoSU033F_B11_BE490219Ta20P024F10P015G071F1_093.ab1   336 
  384  C MoSU033R_B11_BE490219Ta20P024F10P015G071R1_093.ab1   356 
  388    MoSU033F_B11_BE490219Ta20P024F10P015G071F1_093.ab1   368 
  432  C MoSU033R_B11_BE490219Ta20P024F10P015G071R1_093.ab1   308 
  444    MoSU033F_B11_BE490219Ta20P024F10P015G071F1_093.ab1   424 
  464  C MoSU033R_B11_BE490219Ta20P024F10P015G071R1_093.ab1   276 
  476    MoSU033F_B11_BE490219Ta20P024F10P015G071F1_093.ab1   456 
  488  C MoSU033R_B11_BE490219Ta20P024F10P015G071R1_093.ab1   252 
  540    MoSU033F_B11_BE490219Ta20P024F10P015G071F1_093.ab1   520 
  552  C MoSU033R_B11_BE490219Ta20P024F10P015G071R1_093.ab1   188 
  556    MoSU033F_B11_BE490219Ta20P024F10P015G071F1_093.ab1   536 
  560  C MoSU033R_B11_BE490219Ta20P024F10P015G071R1_093.ab1   180 
  568    MoSU033F_B11_BE490219Ta20P024F10P015G071F1_093.ab1   548 
  576  C MoSU033R_B11_BE490219Ta20P024F10P015G071R1_093.ab1   164 
  624    MoSU033F_B11_BE490219Ta20P024F10P015G071F1_093.ab1   604 
  628  C MoSU033R_B11_BE490219Ta20P024F10P015G071R1_093.ab1   112 
  664    MoSU033F_B11_BE490219Ta20P024F10P015G071F1_093.ab1   644 
  668  C MoSU033R_B11_BE490219Ta20P024F10P015G071R1_093.ab1    72 
  712    MoSU033F_B11_BE490219Ta20P024F10P015G071F1_093.ab1   692 
  716  C MoSU033R_B11_BE490219Ta20P024F10P015G071R1_093.ab1    24 
  732    MoSU033F_B11_BE490219Ta20P024F10P015G071F1_093.ab1   712 
Contig length: old 769, new 769

Contig length: old 769, new 769
New start: 0