No. words: 1512; after pruning: 1486


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.7 (1,1:730)  703  0.27 0.14 0.00  MoSU033F_D11_BE490219Ta22P024F10P015G071F1_089.ab1        1   731 (41)  C MoSU033R_D11_BE490219Ta22P024F10P015G071R1_089.ab1   (8)   732     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  356 nodes

 180 str. conn. components

Path
    1  C MoSU033R_D11_BE490219Ta22P024F10P015G071R1_089.ab1   740 
   32    MoSU033F_D11_BE490219Ta22P024F10P015G071F1_089.ab1    23 
   56  C MoSU033R_D11_BE490219Ta22P024F10P015G071R1_089.ab1   685 
   76    MoSU033F_D11_BE490219Ta22P024F10P015G071F1_089.ab1    67 
  100  C MoSU033R_D11_BE490219Ta22P024F10P015G071R1_089.ab1   641 
  108    MoSU033F_D11_BE490219Ta22P024F10P015G071F1_089.ab1    99 
  124  C MoSU033R_D11_BE490219Ta22P024F10P015G071R1_089.ab1   617 
  140    MoSU033F_D11_BE490219Ta22P024F10P015G071F1_089.ab1   131 
  168  C MoSU033R_D11_BE490219Ta22P024F10P015G071R1_089.ab1   573 
  200    MoSU033F_D11_BE490219Ta22P024F10P015G071F1_089.ab1   191 
  516  C MoSU033R_D11_BE490219Ta22P024F10P015G071R1_089.ab1   225 
  628    MoSU033F_D11_BE490219Ta22P024F10P015G071F1_089.ab1   619 
  636  C MoSU033R_D11_BE490219Ta22P024F10P015G071R1_089.ab1   105 
  712    MoSU033F_D11_BE490219Ta22P024F10P015G071F1_089.ab1   703 
  716  C MoSU033R_D11_BE490219Ta22P024F10P015G071R1_089.ab1    25 
  724    MoSU033F_D11_BE490219Ta22P024F10P015G071F1_089.ab1   715 
Contig length: old 781, new 781

Contig length: old 781, new 781
New start: 0 
S Change at: 24; seg lengths: entry 1, contig 1