No. words: 1117; after pruning: 1063


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 9.8 (1,1:511)  489  0.39 0.20 0.00  MoSU033F_G03_BE490219Ta23P024C10P015G071F1_019.ab1        1   511 (46)  C MoSU033R_G03_BE490219Ta23P024C10P015G071R1_019.ab1   (47)   513     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  248 nodes

 126 str. conn. components

Path
    1  C MoSU033R_G03_BE490219Ta23P024C10P015G071R1_019.ab1   560 
   97    MoSU033F_G03_BE490219Ta23P024C10P015G071F1_019.ab1    49 
  142  C MoSU033R_G03_BE490219Ta23P024C10P015G071R1_019.ab1   419 
  150    MoSU033F_G03_BE490219Ta23P024C10P015G071F1_019.ab1   102 
  154  C MoSU033R_G03_BE490219Ta23P024C10P015G071R1_019.ab1   407 
  158    MoSU033F_G03_BE490219Ta23P024C10P015G071F1_019.ab1   110 
  328  C MoSU033R_G03_BE490219Ta23P024C10P015G071R1_019.ab1   233 
  356    MoSU033F_G03_BE490219Ta23P024C10P015G071F1_019.ab1   308 
  420  C MoSU033R_G03_BE490219Ta23P024C10P015G071R1_019.ab1   141 
  440    MoSU033F_G03_BE490219Ta23P024C10P015G071F1_019.ab1   392 
  444  C MoSU033R_G03_BE490219Ta23P024C10P015G071R1_019.ab1   117 
  448    MoSU033F_G03_BE490219Ta23P024C10P015G071F1_019.ab1   400 
  452  C MoSU033R_G03_BE490219Ta23P024C10P015G071R1_019.ab1   109 
  488    MoSU033F_G03_BE490219Ta23P024C10P015G071F1_019.ab1   440 
  492  C MoSU033R_G03_BE490219Ta23P024C10P015G071R1_019.ab1    69 
  500    MoSU033F_G03_BE490219Ta23P024C10P015G071F1_019.ab1   452 
  508  C MoSU033R_G03_BE490219Ta23P024C10P015G071R1_019.ab1    53 
  524    MoSU033F_G03_BE490219Ta23P024C10P015G071F1_019.ab1   476 
  552  C MoSU033R_G03_BE490219Ta23P024C10P015G071R1_019.ab1     9 
  556    MoSU033F_G03_BE490219Ta23P024C10P015G071F1_019.ab1   508 
Contig length: old 605, new 605

Contig length: old 605, new 605
New start: 0