No. words: 1338; after pruning: 1312


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.7 (1,1:622)  597  0.48 0.00 0.00  MoSU033F_G06_BE490219Ta23P024E10P015G071F1_036.ab1        1   623 (44)  C MoSU033R_G06_BE490219Ta23P024E10P015G071R1_036.ab1   (48)   623     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1  C MoSU033R_G06_BE490219Ta23P024E10P015G071R1_036.ab1   671 
   56    MoSU033F_G06_BE490219Ta23P024E10P015G071F1_036.ab1     8 
   68  C MoSU033R_G06_BE490219Ta23P024E10P015G071R1_036.ab1   604 
   84    MoSU033F_G06_BE490219Ta23P024E10P015G071F1_036.ab1    36 
  104  C MoSU033R_G06_BE490219Ta23P024E10P015G071R1_036.ab1   568 
  108    MoSU033F_G06_BE490219Ta23P024E10P015G071F1_036.ab1    60 
  176  C MoSU033R_G06_BE490219Ta23P024E10P015G071R1_036.ab1   496 
  180    MoSU033F_G06_BE490219Ta23P024E10P015G071F1_036.ab1   132 
  538  C MoSU033R_G06_BE490219Ta23P024E10P015G071R1_036.ab1   134 
  542    MoSU033F_G06_BE490219Ta23P024E10P015G071F1_036.ab1   494 
  554  C MoSU033R_G06_BE490219Ta23P024E10P015G071R1_036.ab1   118 
  558    MoSU033F_G06_BE490219Ta23P024E10P015G071F1_036.ab1   510 
  574  C MoSU033R_G06_BE490219Ta23P024E10P015G071R1_036.ab1    98 
  610    MoSU033F_G06_BE490219Ta23P024E10P015G071F1_036.ab1   562 
  630  C MoSU033R_G06_BE490219Ta23P024E10P015G071R1_036.ab1    42 
  666    MoSU033F_G06_BE490219Ta23P024E10P015G071F1_036.ab1   618 
Contig length: old 715, new 715

Contig length: old 715, new 715
New start: 0