No. words: 1484; after pruning: 1458


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.9 (1,1:730)  698  0.00 0.00 0.00  MoSU033F_E11_BE490219Ta23P024F10P015G071F1_087.ab1       17   731 (38)  C MoSU033R_E11_BE490219Ta23P024F10P015G071R1_087.ab1   (0)   715     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  358 nodes

 181 str. conn. components

Path
    1    MoSU033F_E11_BE490219Ta23P024F10P015G071F1_087.ab1     1 
  200  C MoSU033R_E11_BE490219Ta23P024F10P015G071R1_087.ab1   532 
  320    MoSU033F_E11_BE490219Ta23P024F10P015G071F1_087.ab1   320 
  496  C MoSU033R_E11_BE490219Ta23P024F10P015G071R1_087.ab1   236 
  576    MoSU033F_E11_BE490219Ta23P024F10P015G071F1_087.ab1   576 
  588  C MoSU033R_E11_BE490219Ta23P024F10P015G071R1_087.ab1   144 
  620    MoSU033F_E11_BE490219Ta23P024F10P015G071F1_087.ab1   620 
  624  C MoSU033R_E11_BE490219Ta23P024F10P015G071R1_087.ab1   108 
  684    MoSU033F_E11_BE490219Ta23P024F10P015G071F1_087.ab1   684 
  688  C MoSU033R_E11_BE490219Ta23P024F10P015G071R1_087.ab1    44 
  720    MoSU033F_E11_BE490219Ta23P024F10P015G071F1_087.ab1   720 
Contig length: old 769, new 769

Contig length: old 769, new 769
New start: 0