No. words: 1318; after pruning: 1292


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:615)  599  0.00 0.00 0.00  MoSU033F_H06_BE490219Ta24P024E10P015G071F1_034.ab1        1   616 (41)  C MoSU033R_H06_BE490219Ta24P024E10P015G071R1_034.ab1   (45)   616     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  308 nodes

 156 str. conn. components

Path
    1  C MoSU033R_H06_BE490219Ta24P024E10P015G071R1_034.ab1   661 
  117    MoSU033F_H06_BE490219Ta24P024E10P015G071F1_034.ab1    72 
  121  C MoSU033R_H06_BE490219Ta24P024E10P015G071R1_034.ab1   541 
  137    MoSU033F_H06_BE490219Ta24P024E10P015G071F1_034.ab1    92 
  149  C MoSU033R_H06_BE490219Ta24P024E10P015G071R1_034.ab1   513 
  177    MoSU033F_H06_BE490219Ta24P024E10P015G071F1_034.ab1   132 
  489  C MoSU033R_H06_BE490219Ta24P024E10P015G071R1_034.ab1   173 
  505    MoSU033F_H06_BE490219Ta24P024E10P015G071F1_034.ab1   460 
  533  C MoSU033R_H06_BE490219Ta24P024E10P015G071R1_034.ab1   129 
  557    MoSU033F_H06_BE490219Ta24P024E10P015G071F1_034.ab1   512 
  561  C MoSU033R_H06_BE490219Ta24P024E10P015G071R1_034.ab1   101 
  613    MoSU033F_H06_BE490219Ta24P024E10P015G071F1_034.ab1   568 
Contig length: old 702, new 702

Contig length: old 702, new 702
New start: 0