No. words: 1320; after pruning: 1294


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.5 (1,1:615)  596  0.16 0.00 0.00  MoSU033F_A04_BE490219Td01P024E10P015G071F1_032.ab1        1   616 (42)  C MoSU033R_A04_BE490219Td01P024E10P015G071R1_032.ab1   (46)   616     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1  C MoSU033R_A04_BE490219Td01P024E10P015G071R1_032.ab1   662 
  126    MoSU033F_A04_BE490219Td01P024E10P015G071F1_032.ab1    80 
  162  C MoSU033R_A04_BE490219Td01P024E10P015G071R1_032.ab1   501 
  178    MoSU033F_A04_BE490219Td01P024E10P015G071F1_032.ab1   132 
  186  C MoSU033R_A04_BE490219Td01P024E10P015G071R1_032.ab1   477 
  194    MoSU033F_A04_BE490219Td01P024E10P015G071F1_032.ab1   148 
  226  C MoSU033R_A04_BE490219Td01P024E10P015G071R1_032.ab1   437 
  246    MoSU033F_A04_BE490219Td01P024E10P015G071F1_032.ab1   200 
  314  C MoSU033R_A04_BE490219Td01P024E10P015G071R1_032.ab1   349 
  322    MoSU033F_A04_BE490219Td01P024E10P015G071F1_032.ab1   276 
  430  C MoSU033R_A04_BE490219Td01P024E10P015G071R1_032.ab1   233 
  506    MoSU033F_A04_BE490219Td01P024E10P015G071F1_032.ab1   460 
  570  C MoSU033R_A04_BE490219Td01P024E10P015G071R1_032.ab1    93 
  578    MoSU033F_A04_BE490219Td01P024E10P015G071F1_032.ab1   532 
  586  C MoSU033R_A04_BE490219Td01P024E10P015G071R1_032.ab1    77 
  598    MoSU033F_A04_BE490219Td01P024E10P015G071F1_032.ab1   552 
Contig length: old 704, new 704

Contig length: old 704, new 704
New start: 0