No. words: 1322; after pruning: 1296


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:615)  599  0.00 0.00 0.00  MoSU033F_E04_BE490219Td05P024E10P015G071F1_024.ab1        1   616 (45)  C MoSU033R_E04_BE490219Td05P024E10P015G071R1_024.ab1   (45)   616     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  308 nodes

 156 str. conn. components

Path
    1  C MoSU033R_E04_BE490219Td05P024E10P015G071R1_024.ab1   661 
  117    MoSU033F_E04_BE490219Td05P024E10P015G071F1_024.ab1    72 
  149  C MoSU033R_E04_BE490219Td05P024E10P015G071R1_024.ab1   513 
  305    MoSU033F_E04_BE490219Td05P024E10P015G071F1_024.ab1   260 
  313  C MoSU033R_E04_BE490219Td05P024E10P015G071R1_024.ab1   349 
  385    MoSU033F_E04_BE490219Td05P024E10P015G071F1_024.ab1   340 
  457  C MoSU033R_E04_BE490219Td05P024E10P015G071R1_024.ab1   205 
  505    MoSU033F_E04_BE490219Td05P024E10P015G071F1_024.ab1   460 
  521  C MoSU033R_E04_BE490219Td05P024E10P015G071R1_024.ab1   141 
  529    MoSU033F_E04_BE490219Td05P024E10P015G071F1_024.ab1   484 
  537  C MoSU033R_E04_BE490219Td05P024E10P015G071R1_024.ab1   125 
  561    MoSU033F_E04_BE490219Td05P024E10P015G071F1_024.ab1   516 
  565  C MoSU033R_E04_BE490219Td05P024E10P015G071R1_024.ab1    97 
  573    MoSU033F_E04_BE490219Td05P024E10P015G071F1_024.ab1   528 
  581  C MoSU033R_E04_BE490219Td05P024E10P015G071R1_024.ab1    81 
  601    MoSU033F_E04_BE490219Td05P024E10P015G071F1_024.ab1   556 
Contig length: old 706, new 706

Contig length: old 706, new 706
New start: 0