No. words: 1336; after pruning: 1310


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:633)  608  0.00 0.32 0.00  MoSU033F_G04_BE490219Td07P024E10P015G071F1_020.ab1        1   633 (42)  C MoSU033R_G04_BE490219Td07P024E10P015G071R1_020.ab1   (26)   635     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1  C MoSU033R_G04_BE490219Td07P024E10P015G071R1_020.ab1   661 
  126    MoSU033F_G04_BE490219Td07P024E10P015G071F1_020.ab1    98 
  134  C MoSU033R_G04_BE490219Td07P024E10P015G071R1_020.ab1   528 
  142    MoSU033F_G04_BE490219Td07P024E10P015G071F1_020.ab1   114 
  162  C MoSU033R_G04_BE490219Td07P024E10P015G071R1_020.ab1   500 
  178    MoSU033F_G04_BE490219Td07P024E10P015G071F1_020.ab1   150 
  194  C MoSU033R_G04_BE490219Td07P024E10P015G071R1_020.ab1   468 
  242    MoSU033F_G04_BE490219Td07P024E10P015G071F1_020.ab1   214 
  250  C MoSU033R_G04_BE490219Td07P024E10P015G071R1_020.ab1   412 
  258    MoSU033F_G04_BE490219Td07P024E10P015G071F1_020.ab1   230 
  578  C MoSU033R_G04_BE490219Td07P024E10P015G071R1_020.ab1    84 
  602    MoSU033F_G04_BE490219Td07P024E10P015G071F1_020.ab1   574 
Contig length: old 702, new 703

Contig length: old 703, new 703
New start: 0