No. words: 1319; after pruning: 1293


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:615)  599  0.00 0.00 0.00  MoSU033F_H04_BE490219Td08P024E10P015G071F1_018.ab1        1   616 (41)  C MoSU033R_H04_BE490219Td08P024E10P015G071R1_018.ab1   (46)   616     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  308 nodes

 156 str. conn. components

Path
    1  C MoSU033R_H04_BE490219Td08P024E10P015G071R1_018.ab1   662 
  118    MoSU033F_H04_BE490219Td08P024E10P015G071F1_018.ab1    72 
  122  C MoSU033R_H04_BE490219Td08P024E10P015G071R1_018.ab1   541 
  138    MoSU033F_H04_BE490219Td08P024E10P015G071F1_018.ab1    92 
  150  C MoSU033R_H04_BE490219Td08P024E10P015G071R1_018.ab1   513 
  178    MoSU033F_H04_BE490219Td08P024E10P015G071F1_018.ab1   132 
  194  C MoSU033R_H04_BE490219Td08P024E10P015G071R1_018.ab1   469 
  222    MoSU033F_H04_BE490219Td08P024E10P015G071F1_018.ab1   176 
  490  C MoSU033R_H04_BE490219Td08P024E10P015G071R1_018.ab1   173 
  506    MoSU033F_H04_BE490219Td08P024E10P015G071F1_018.ab1   460 
Contig length: old 703, new 703

Contig length: old 703, new 703
New start: 0