No. words: 1325; after pruning: 1299


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.3 (1,1:615)  590  0.49 0.00 0.00  MoSU033F_B05_BE490219Td10P024E10P015G071F1_045.ab1        1   616 (44)  C MoSU033R_B05_BE490219Td10P024E10P015G071R1_045.ab1   (49)   616     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1  C MoSU033R_B05_BE490219Td10P024E10P015G071R1_045.ab1   665 
   69    MoSU033F_B05_BE490219Td10P024E10P015G071F1_045.ab1    20 
   73  C MoSU033R_B05_BE490219Td10P024E10P015G071R1_045.ab1   593 
   89    MoSU033F_B05_BE490219Td10P024E10P015G071F1_045.ab1    40 
   93  C MoSU033R_B05_BE490219Td10P024E10P015G071R1_045.ab1   573 
  121    MoSU033F_B05_BE490219Td10P024E10P015G071F1_045.ab1    72 
  133  C MoSU033R_B05_BE490219Td10P024E10P015G071R1_045.ab1   533 
  137    MoSU033F_B05_BE490219Td10P024E10P015G071F1_045.ab1    88 
  141  C MoSU033R_B05_BE490219Td10P024E10P015G071R1_045.ab1   525 
  161    MoSU033F_B05_BE490219Td10P024E10P015G071F1_045.ab1   112 
  169  C MoSU033R_B05_BE490219Td10P024E10P015G071R1_045.ab1   497 
  181    MoSU033F_B05_BE490219Td10P024E10P015G071F1_045.ab1   132 
  209  C MoSU033R_B05_BE490219Td10P024E10P015G071R1_045.ab1   457 
  213    MoSU033F_B05_BE490219Td10P024E10P015G071F1_045.ab1   164 
  221  C MoSU033R_B05_BE490219Td10P024E10P015G071R1_045.ab1   445 
  225    MoSU033F_B05_BE490219Td10P024E10P015G071F1_045.ab1   176 
  237  C MoSU033R_B05_BE490219Td10P024E10P015G071R1_045.ab1   429 
  249    MoSU033F_B05_BE490219Td10P024E10P015G071F1_045.ab1   200 
  349  C MoSU033R_B05_BE490219Td10P024E10P015G071R1_045.ab1   317 
  353    MoSU033F_B05_BE490219Td10P024E10P015G071F1_045.ab1   304 
  521  C MoSU033R_B05_BE490219Td10P024E10P015G071R1_045.ab1   145 
  525    MoSU033F_B05_BE490219Td10P024E10P015G071F1_045.ab1   476 
  549  C MoSU033R_B05_BE490219Td10P024E10P015G071R1_045.ab1   117 
  557    MoSU033F_B05_BE490219Td10P024E10P015G071F1_045.ab1   508 
  585  C MoSU033R_B05_BE490219Td10P024E10P015G071R1_045.ab1    81 
  597    MoSU033F_B05_BE490219Td10P024E10P015G071F1_045.ab1   548 
  625  C MoSU033R_B05_BE490219Td10P024E10P015G071R1_045.ab1    41 
  645    MoSU033F_B05_BE490219Td10P024E10P015G071F1_045.ab1   596 
  649  C MoSU033R_B05_BE490219Td10P024E10P015G071R1_045.ab1    17 
  657    MoSU033F_B05_BE490219Td10P024E10P015G071F1_045.ab1   608 
Contig length: old 709, new 709

Contig length: old 709, new 709
New start: 0