No. words: 1354; after pruning: 1328


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.2 (1,1:823)  514  0.00 0.00 0.19  MoSU005F_B01_BE490219Tu02P015G01G071F1_009.ab1      105   634 (0)  C MoSU005R_B01_BE490219Tu02P015G01G071R1_009.ab1   (0)   720   192 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  264 nodes

 134 str. conn. components

Path
    1    MoSU005F_B01_BE490219Tu02P015G01G071F1_009.ab1     1 
  328  C MoSU005R_B01_BE490219Tu02P015G01G071R1_009.ab1   497 
  332    MoSU005F_B01_BE490219Tu02P015G01G071F1_009.ab1   332 
  360  C MoSU005R_B01_BE490219Tu02P015G01G071R1_009.ab1   465 
  372    MoSU005F_B01_BE490219Tu02P015G01G071F1_009.ab1   372 
  380  C MoSU005R_B01_BE490219Tu02P015G01G071R1_009.ab1   445 
  388    MoSU005F_B01_BE490219Tu02P015G01G071F1_009.ab1   388 
  396  C MoSU005R_B01_BE490219Tu02P015G01G071R1_009.ab1   429 
  412    MoSU005F_B01_BE490219Tu02P015G01G071F1_009.ab1   412 
  420  C MoSU005R_B01_BE490219Tu02P015G01G071R1_009.ab1   405 
  436    MoSU005F_B01_BE490219Tu02P015G01G071F1_009.ab1   436 
  440  C MoSU005R_B01_BE490219Tu02P015G01G071R1_009.ab1   385 
  468    MoSU005F_B01_BE490219Tu02P015G01G071F1_009.ab1   468 
  476  C MoSU005R_B01_BE490219Tu02P015G01G071R1_009.ab1   349 
  496    MoSU005F_B01_BE490219Tu02P015G01G071F1_009.ab1   496 
  500  C MoSU005R_B01_BE490219Tu02P015G01G071R1_009.ab1   325 
Contig length: old 824, new 824

Contig length: old 824, new 824
New start: 0