No. words: 1551; after pruning: 1525


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:622)  599  0.00 0.00 0.16  MoSU024F_G11_BE493868Ld01P019C06P019C121F1_083.ab1        1   623 (155)  C MoSU024R_G11_BE493868Ld01P019C06P019C121R1_083.ab1   (151)   622     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1  C MoSU024R_G11_BE493868Ld01P019C06P019C121R1_083.ab1   773 
  168    MoSU024F_G11_BE493868Ld01P019C06P019C121F1_083.ab1    17 
  172  C MoSU024R_G11_BE493868Ld01P019C06P019C121R1_083.ab1   602 
  176    MoSU024F_G11_BE493868Ld01P019C06P019C121F1_083.ab1    25 
  180  C MoSU024R_G11_BE493868Ld01P019C06P019C121R1_083.ab1   594 
  192    MoSU024F_G11_BE493868Ld01P019C06P019C121F1_083.ab1    41 
  232  C MoSU024R_G11_BE493868Ld01P019C06P019C121R1_083.ab1   542 
  236    MoSU024F_G11_BE493868Ld01P019C06P019C121F1_083.ab1    85 
  240  C MoSU024R_G11_BE493868Ld01P019C06P019C121R1_083.ab1   534 
  256    MoSU024F_G11_BE493868Ld01P019C06P019C121F1_083.ab1   105 
  260  C MoSU024R_G11_BE493868Ld01P019C06P019C121R1_083.ab1   514 
  272    MoSU024F_G11_BE493868Ld01P019C06P019C121F1_083.ab1   121 
  288  C MoSU024R_G11_BE493868Ld01P019C06P019C121R1_083.ab1   486 
  492    MoSU024F_G11_BE493868Ld01P019C06P019C121F1_083.ab1   341 
  652  C MoSU024R_G11_BE493868Ld01P019C06P019C121R1_083.ab1   122 
  656    MoSU024F_G11_BE493868Ld01P019C06P019C121F1_083.ab1   505 
  660  C MoSU024R_G11_BE493868Ld01P019C06P019C121R1_083.ab1   114 
  664    MoSU024F_G11_BE493868Ld01P019C06P019C121F1_083.ab1   513 
  692  C MoSU024R_G11_BE493868Ld01P019C06P019C121R1_083.ab1    82 
  700    MoSU024F_G11_BE493868Ld01P019C06P019C121F1_083.ab1   549 
  720  C MoSU024R_G11_BE493868Ld01P019C06P019C121R1_083.ab1    54 
  744    MoSU024F_G11_BE493868Ld01P019C06P019C121F1_083.ab1   593 
  748  C MoSU024R_G11_BE493868Ld01P019C06P019C121R1_083.ab1    26 
  756    MoSU024F_G11_BE493868Ld01P019C06P019C121F1_083.ab1   605 
Contig length: old 928, new 929

Contig length: old 929, new 929
New start: 0