No. words: 1532; after pruning: 1506


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 13.8 (1,1:639)  613  0.00 0.00 0.16  MoSU024F_B12_BE493868Ld03P019C06P019C121F1_094.ab1        3   640 (138)  C MoSU024R_B12_BE493868Ld03P019C06P019C121R1_094.ab1   (117)   637     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  318 nodes

 161 str. conn. components

Path
    1  C MoSU024R_B12_BE493868Ld03P019C06P019C121R1_094.ab1   754 
  145    MoSU024F_B12_BE493868Ld03P019C06P019C121F1_094.ab1    30 
  161  C MoSU024R_B12_BE493868Ld03P019C06P019C121R1_094.ab1   594 
  165    MoSU024F_B12_BE493868Ld03P019C06P019C121F1_094.ab1    50 
  189  C MoSU024R_B12_BE493868Ld03P019C06P019C121R1_094.ab1   566 
  217    MoSU024F_B12_BE493868Ld03P019C06P019C121F1_094.ab1   102 
  221  C MoSU024R_B12_BE493868Ld03P019C06P019C121R1_094.ab1   534 
  257    MoSU024F_B12_BE493868Ld03P019C06P019C121F1_094.ab1   142 
  653  C MoSU024R_B12_BE493868Ld03P019C06P019C121R1_094.ab1   102 
  689    MoSU024F_B12_BE493868Ld03P019C06P019C121F1_094.ab1   574 
  693  C MoSU024R_B12_BE493868Ld03P019C06P019C121R1_094.ab1    62 
  741    MoSU024F_B12_BE493868Ld03P019C06P019C121F1_094.ab1   626 
Contig length: old 892, new 893

Contig length: old 893, new 893
New start: 0