No. words: 1486; after pruning: 1446


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:633)  611  0.00 0.16 0.00  MoSU024F_F12_BE493868Ld07P019C06P019C121F1_086.ab1        1   634 (144)  C MoSU024R_F12_BE493868Ld07P019C06P019C121R1_086.ab1   (73)   635     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C MoSU024R_F12_BE493868Ld07P019C06P019C121R1_086.ab1   708 
  102    MoSU024F_F12_BE493868Ld07P019C06P019C121F1_086.ab1    28 
  114  C MoSU024R_F12_BE493868Ld07P019C06P019C121R1_086.ab1   595 
  118    MoSU024F_F12_BE493868Ld07P019C06P019C121F1_086.ab1    44 
  134  C MoSU024R_F12_BE493868Ld07P019C06P019C121R1_086.ab1   575 
  210    MoSU024F_F12_BE493868Ld07P019C06P019C121F1_086.ab1   136 
  622  C MoSU024R_F12_BE493868Ld07P019C06P019C121R1_086.ab1    87 
  626    MoSU024F_F12_BE493868Ld07P019C06P019C121F1_086.ab1   552 
  634  C MoSU024R_F12_BE493868Ld07P019C06P019C121R1_086.ab1    75 
  642    MoSU024F_F12_BE493868Ld07P019C06P019C121F1_086.ab1   568 
  650  C MoSU024R_F12_BE493868Ld07P019C06P019C121R1_086.ab1    59 
  666    MoSU024F_F12_BE493868Ld07P019C06P019C121F1_086.ab1   592 
  670  C MoSU024R_F12_BE493868Ld07P019C06P019C121R1_086.ab1    39 
  682    MoSU024F_F12_BE493868Ld07P019C06P019C121F1_086.ab1   608 
  686  C MoSU024R_F12_BE493868Ld07P019C06P019C121R1_086.ab1    23 
  694    MoSU024F_F12_BE493868Ld07P019C06P019C121F1_086.ab1   620 
Contig length: old 852, new 852

Contig length: old 852, new 852
New start: 0 
S Change at: 60; seg lengths: entry 1, contig 1