No. words: 1487; after pruning: 1447


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.1 (1,1:634)  616  0.00 0.00 0.00  MoSU024F_G12_BE493868Ld08P019C06P019C121F1_084.ab1        1   635 (144)  C MoSU024R_G12_BE493868Ld08P019C06P019C121R1_084.ab1   (73)   635     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1  C MoSU024R_G12_BE493868Ld08P019C06P019C121R1_084.ab1   708 
  101    MoSU024F_G12_BE493868Ld08P019C06P019C121F1_084.ab1    28 
  105  C MoSU024R_G12_BE493868Ld08P019C06P019C121R1_084.ab1   604 
  117    MoSU024F_G12_BE493868Ld08P019C06P019C121F1_084.ab1    44 
  133  C MoSU024R_G12_BE493868Ld08P019C06P019C121R1_084.ab1   576 
  169    MoSU024F_G12_BE493868Ld08P019C06P019C121F1_084.ab1    96 
  189  C MoSU024R_G12_BE493868Ld08P019C06P019C121R1_084.ab1   520 
  201    MoSU024F_G12_BE493868Ld08P019C06P019C121F1_084.ab1   128 
  661  C MoSU024R_G12_BE493868Ld08P019C06P019C121R1_084.ab1    48 
  665    MoSU024F_G12_BE493868Ld08P019C06P019C121F1_084.ab1   592 
  673  C MoSU024R_G12_BE493868Ld08P019C06P019C121R1_084.ab1    36 
  685    MoSU024F_G12_BE493868Ld08P019C06P019C121F1_084.ab1   612 
  689  C MoSU024R_G12_BE493868Ld08P019C06P019C121R1_084.ab1    20 
  693    MoSU024F_G12_BE493868Ld08P019C06P019C121F1_084.ab1   620 
Contig length: old 852, new 852

Contig length: old 852, new 852
New start: 0 
S Change at: 60; seg lengths: entry 1, contig 1