No. words: 1086; after pruning: 1060


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:499)  487  0.80 0.00 0.00  MoSU010F_C03_BE493897As01P018F01P018F071F1_027.ab1        1   500 (42)  C MoSU010R_C03_BE493897As01P018F01P018F071R1_027.ab1   (44)   500     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1  C MoSU010R_C03_BE493897As01P018F01P018F071R1_027.ab1   544 
   48    MoSU010F_C03_BE493897As01P018F01P018F071F1_027.ab1     4 
   52  C MoSU010R_C03_BE493897As01P018F01P018F071R1_027.ab1   493 
   60    MoSU010F_C03_BE493897As01P018F01P018F071F1_027.ab1    16 
Contig length: old 586, new 586

Contig length: old 586, new 586
New start: 0