No. words: 1069; after pruning: 1043


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.7 (1,1:477)  443  1.68 0.42 0.00  MoSU010F_D03_BE493897As02P018F01P018F071F1_025.ab1        1   476 (68)  C MoSU010R_D03_BE493897As02P018F01P018F071R1_025.ab1   (47)   478     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1  C MoSU010R_D03_BE493897As02P018F01P018F071R1_025.ab1   525 
   51    MoSU010F_D03_BE493897As02P018F01P018F071F1_025.ab1     4 
Contig length: old 591, new 591

Contig length: old 591, new 591
New start: 0