No. words: 1260; after pruning: 1234


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 9.2 (1,1:449)  442  0.22 0.00 0.00  MoSU010F_B04_BE493897Ld04P018F01P018F071F1_030.ab1        4   450 (211)  C MoSU010R_B04_BE493897Ld04P018F01P018F071R1_030.ab1   (152)   447     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  220 nodes

 112 str. conn. components

Path
    1  C MoSU010R_B04_BE493897Ld04P018F01P018F071R1_030.ab1   599 
  156    MoSU010F_B04_BE493897Ld04P018F01P018F071F1_030.ab1     7 
Contig length: old 810, new 810

Contig length: old 810, new 810
New start: 0