No. words: 1332; after pruning: 1306


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:501)  486  0.60 0.00 0.20  MoSU010F_E04_BE493897Ld07P018F01P018F071F1_024.ab1        1   502 (157)  C MoSU010R_E04_BE493897Ld07P018F01P018F071R1_024.ab1   (172)   501     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C MoSU010R_E04_BE493897Ld07P018F01P018F071R1_024.ab1   673 
  188    MoSU010F_E04_BE493897Ld07P018F01P018F071F1_024.ab1    16 
  236  C MoSU010R_E04_BE493897Ld07P018F01P018F071R1_024.ab1   438 
  240    MoSU010F_E04_BE493897Ld07P018F01P018F071F1_024.ab1    68 
Contig length: old 830, new 831

Contig length: old 831, new 831
New start: 0