No. words: 1281; after pruning: 1255


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.8 (1,1:449)  431  0.89 0.00 0.22  MoSU010F_F04_BE493897Ld08P018F01P018F071F1_022.ab1        1   450 (214)  C MoSU010R_F04_BE493897Ld08P018F01P018F071R1_022.ab1   (168)   449     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  210 nodes

 107 str. conn. components

Path
    1  C MoSU010R_F04_BE493897Ld08P018F01P018F071R1_022.ab1   617 
  180    MoSU010F_F04_BE493897Ld08P018F01P018F071F1_022.ab1    12 
  184  C MoSU010R_F04_BE493897Ld08P018F01P018F071R1_022.ab1   434 
  211    MoSU010F_F04_BE493897Ld08P018F01P018F071F1_022.ab1    43 
  235  C MoSU010R_F04_BE493897Ld08P018F01P018F071R1_022.ab1   383 
  248    MoSU010F_F04_BE493897Ld08P018F01P018F071F1_022.ab1    81 
Contig length: old 831, new 831

Contig length: old 831, new 831
New start: 0