No. words: 1305; after pruning: 1279


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 9.7 (1,1:481)  473  0.21 0.00 0.00  MoSU010F_G04_BE493897Ld09P018F01P018F071F1_020.ab1        5   482 (189)  C MoSU010R_G04_BE493897Ld09P018F01P018F071R1_020.ab1   (156)   478     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C MoSU010R_G04_BE493897Ld09P018F01P018F071R1_020.ab1   634 
  164    MoSU010F_G04_BE493897Ld09P018F01P018F071F1_020.ab1    12 
  172  C MoSU010R_G04_BE493897Ld09P018F01P018F071R1_020.ab1   463 
  176    MoSU010F_G04_BE493897Ld09P018F01P018F071F1_020.ab1    24 
Contig length: old 823, new 823

Contig length: old 823, new 823
New start: 0