No. words: 809; after pruning: 783


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.4 (1,1:352)  340  0.28 0.57 0.00  MoSU028F_E06_BE493897Sn31P018F01P030F111F1_040.ab1        1   351 (47)  C MoSU028R_E06_BE493897Sn31P018F01P030F111R1_040.ab1   (58)   353     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  172 nodes

 88 str. conn. components

Path
    1  C MoSU028R_E06_BE493897Sn31P018F01P030F111R1_040.ab1   411 
  106    MoSU028F_E06_BE493897Sn31P018F01P030F111F1_040.ab1    48 
  114  C MoSU028R_E06_BE493897Sn31P018F01P030F111R1_040.ab1   298 
  146    MoSU028F_E06_BE493897Sn31P018F01P030F111F1_040.ab1    88 
  170  C MoSU028R_E06_BE493897Sn31P018F01P030F111R1_040.ab1   242 
  206    MoSU028F_E06_BE493897Sn31P018F01P030F111F1_040.ab1   148 
  246  C MoSU028R_E06_BE493897Sn31P018F01P030F111R1_040.ab1   166 
  262    MoSU028F_E06_BE493897Sn31P018F01P030F111F1_040.ab1   204 
  266  C MoSU028R_E06_BE493897Sn31P018F01P030F111R1_040.ab1   146 
  298    MoSU028F_E06_BE493897Sn31P018F01P030F111F1_040.ab1   240 
  334  C MoSU028R_E06_BE493897Sn31P018F01P030F111R1_040.ab1    78 
  338    MoSU028F_E06_BE493897Sn31P018F01P030F111F1_040.ab1   280 
Contig length: old 456, new 456

Contig length: old 456, new 456
New start: 0