No. words: 877; after pruning: 851


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 7.0 (1,1:400)  385  0.00 0.00 0.75  MoSU027F_G08_BE493897Ta15P018F01P030D111F1_052.ab1        1   400 (31)  C MoSU027R_G08_BE493897Ta15P018F01P030D111R1_052.ab1   (46)   400     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  196 nodes

 100 str. conn. components

Path
    1  C MoSU027R_G08_BE493897Ta15P018F01P030D111R1_052.ab1   446 
  258    MoSU027F_G08_BE493897Ta15P018F01P030D111F1_052.ab1   212 
  322  C MoSU027R_G08_BE493897Ta15P018F01P030D111R1_052.ab1   125 
  330    MoSU027F_G08_BE493897Ta15P018F01P030D111F1_052.ab1   284 
  350  C MoSU027R_G08_BE493897Ta15P018F01P030D111R1_052.ab1    97 
  386    MoSU027F_G08_BE493897Ta15P018F01P030D111F1_052.ab1   340 
  390  C MoSU027R_G08_BE493897Ta15P018F01P030D111R1_052.ab1    57 
  402    MoSU027F_G08_BE493897Ta15P018F01P030D111F1_052.ab1   356 
Contig length: old 476, new 477

Contig length: old 477, new 477
New start: 0