No. words: 794; after pruning: 768


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 4.8 (1,1:350)  328  2.00 0.00 0.00  MoSU027F_G05_BE493897Ta15P030D10P018F071F1_035.ab1        2   351 (52)  C MoSU027R_G05_BE493897Ta15P030D10P018F071R1_035.ab1   (41)   350     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  160 nodes

 82 str. conn. components

Path
    1  C MoSU027R_G05_BE493897Ta15P030D10P018F071R1_035.ab1   391 
   53    MoSU027F_G05_BE493897Ta15P030D10P018F071F1_035.ab1    13 
   82  C MoSU027R_G05_BE493897Ta15P030D10P018F071R1_035.ab1   310 
   94    MoSU027F_G05_BE493897Ta15P030D10P018F071F1_035.ab1    54 
  122  C MoSU027R_G05_BE493897Ta15P030D10P018F071R1_035.ab1   270 
  133    MoSU027F_G05_BE493897Ta15P030D10P018F071F1_035.ab1    93 
  323  C MoSU027R_G05_BE493897Ta15P030D10P018F071R1_035.ab1    69 
  327    MoSU027F_G05_BE493897Ta15P030D10P018F071F1_035.ab1   287 
  363  C MoSU027R_G05_BE493897Ta15P030D10P018F071R1_035.ab1    29 
  371    MoSU027F_G05_BE493897Ta15P030D10P018F071F1_035.ab1   331 
Contig length: old 443, new 443

Contig length: old 443, new 443
New start: 0 
S Change at: 359; seg lengths: entry 1, contig 1