No. words: 873; after pruning: 847


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.8 (1,1:393)  379  0.00 0.00 0.76  MoSU027F_F09_BE493897Ta22P018F01P030D111F1_069.ab1        1   394 (32)  C MoSU027R_F09_BE493897Ta22P018F01P030D111R1_069.ab1   (54)   393     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  194 nodes

 99 str. conn. components

Path
    1  C MoSU027R_F09_BE493897Ta22P018F01P030D111R1_069.ab1   447 
  158    MoSU027F_F09_BE493897Ta22P018F01P030D111F1_069.ab1   104 
  214  C MoSU027R_F09_BE493897Ta22P018F01P030D111R1_069.ab1   234 
  250    MoSU027F_F09_BE493897Ta22P018F01P030D111F1_069.ab1   196 
  374  C MoSU027R_F09_BE493897Ta22P018F01P030D111R1_069.ab1    74 
  382    MoSU027F_F09_BE493897Ta22P018F01P030D111F1_069.ab1   328 
Contig length: old 479, new 480

Contig length: old 480, new 480
New start: 0