No. words: 870; after pruning: 844


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 5.4 (1,1:395)  379  0.00 0.00 0.76  MoSU027F_A08_BE493897Td09P018F01P030D111F1_064.ab1        1   394 (29)  C MoSU027R_A08_BE493897Td09P018F01P030D111R1_064.ab1   (52)   395     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  194 nodes

 99 str. conn. components

Path
    1  C MoSU027R_A08_BE493897Td09P018F01P030D111R1_064.ab1   447 
  152    MoSU027F_A08_BE493897Td09P018F01P030D111F1_064.ab1   100 
  228  C MoSU027R_A08_BE493897Td09P018F01P030D111R1_064.ab1   220 
  248    MoSU027F_A08_BE493897Td09P018F01P030D111F1_064.ab1   196 
  256  C MoSU027R_A08_BE493897Td09P018F01P030D111R1_064.ab1   192 
  272    MoSU027F_A08_BE493897Td09P018F01P030D111F1_064.ab1   220 
  324  C MoSU027R_A08_BE493897Td09P018F01P030D111R1_064.ab1   124 
  340    MoSU027F_A08_BE493897Td09P018F01P030D111F1_064.ab1   288 
  364  C MoSU027R_A08_BE493897Td09P018F01P030D111R1_064.ab1    84 
  404    MoSU027F_A08_BE493897Td09P018F01P030D111F1_064.ab1   352 
Contig length: old 474, new 475

Contig length: old 475, new 475
New start: 0