No. words: 1090; after pruning: 1064


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.7 (1,1:497)  486  0.40 0.00 0.20  MoSU009F_B05_BE493897Tu02P015E01P015E071F1_045.ab1        1   498 (44)  C MoSU009R_B05_BE493897Tu02P015E01P015E071R1_045.ab1   (51)   497     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C MoSU009R_B05_BE493897Tu02P015E01P015E071R1_045.ab1   548 
  141    MoSU009F_B05_BE493897Tu02P015E01P015E071F1_045.ab1    90 
  145  C MoSU009R_B05_BE493897Tu02P015E01P015E071R1_045.ab1   404 
  149    MoSU009F_B05_BE493897Tu02P015E01P015E071F1_045.ab1    98 
  153  C MoSU009R_B05_BE493897Tu02P015E01P015E071R1_045.ab1   396 
  161    MoSU009F_B05_BE493897Tu02P015E01P015E071F1_045.ab1   110 
  201  C MoSU009R_B05_BE493897Tu02P015E01P015E071R1_045.ab1   348 
  209    MoSU009F_B05_BE493897Tu02P015E01P015E071F1_045.ab1   158 
  341  C MoSU009R_B05_BE493897Tu02P015E01P015E071R1_045.ab1   208 
  357    MoSU009F_B05_BE493897Tu02P015E01P015E071F1_045.ab1   306 
  369  C MoSU009R_B05_BE493897Tu02P015E01P015E071R1_045.ab1   180 
  385    MoSU009F_B05_BE493897Tu02P015E01P015E071F1_045.ab1   334 
  409  C MoSU009R_B05_BE493897Tu02P015E01P015E071R1_045.ab1   140 
  425    MoSU009F_B05_BE493897Tu02P015E01P015E071F1_045.ab1   374 
  437  C MoSU009R_B05_BE493897Tu02P015E01P015E071R1_045.ab1   112 
  445    MoSU009F_B05_BE493897Tu02P015E01P015E071F1_045.ab1   394 
  469  C MoSU009R_B05_BE493897Tu02P015E01P015E071R1_045.ab1    80 
  473    MoSU009F_B05_BE493897Tu02P015E01P015E071F1_045.ab1   422 
  477  C MoSU009R_B05_BE493897Tu02P015E01P015E071R1_045.ab1    72 
  489    MoSU009F_B05_BE493897Tu02P015E01P015E071F1_045.ab1   438 
  497  C MoSU009R_B05_BE493897Tu02P015E01P015E071R1_045.ab1    52 
  509    MoSU009F_B05_BE493897Tu02P015E01P015E071F1_045.ab1   458 
  513  C MoSU009R_B05_BE493897Tu02P015E01P015E071R1_045.ab1    36 
  525    MoSU009F_B05_BE493897Tu02P015E01P015E071F1_045.ab1   474 
Contig length: old 592, new 593

Contig length: old 593, new 593
New start: 0