No. words: 1643; after pruning: 1617


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 14.6 (1,1:700)  688  0.14 0.00 0.00  MoSU005F_F05_BE494028Ld01P015F02F081F1_043.ab1        2   699 (123)  C MoSU005R_F05_BE494028Ld01P015F02F081R1_043.ab1   (121)   700     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  348 nodes

 176 str. conn. components

Path
    1  C MoSU005R_F05_BE494028Ld01P015F02F081R1_043.ab1   821 
  129    MoSU005F_F05_BE494028Ld01P015F02F081F1_043.ab1     9 
  137  C MoSU005R_F05_BE494028Ld01P015F02F081R1_043.ab1   685 
  155    MoSU005F_F05_BE494028Ld01P015F02F081F1_043.ab1    35 
  251  C MoSU005R_F05_BE494028Ld01P015F02F081R1_043.ab1   571 
  267    MoSU005F_F05_BE494028Ld01P015F02F081F1_043.ab1   147 
  335  C MoSU005R_F05_BE494028Ld01P015F02F081R1_043.ab1   487 
  339    MoSU005F_F05_BE494028Ld01P015F02F081F1_043.ab1   219 
  347  C MoSU005R_F05_BE494028Ld01P015F02F081R1_043.ab1   475 
  351    MoSU005F_F05_BE494028Ld01P015F02F081F1_043.ab1   231 
  363  C MoSU005R_F05_BE494028Ld01P015F02F081R1_043.ab1   459 
  367    MoSU005F_F05_BE494028Ld01P015F02F081F1_043.ab1   247 
  403  C MoSU005R_F05_BE494028Ld01P015F02F081R1_043.ab1   419 
  415    MoSU005F_F05_BE494028Ld01P015F02F081F1_043.ab1   295 
  423  C MoSU005R_F05_BE494028Ld01P015F02F081R1_043.ab1   399 
  427    MoSU005F_F05_BE494028Ld01P015F02F081F1_043.ab1   307 
  451  C MoSU005R_F05_BE494028Ld01P015F02F081R1_043.ab1   371 
  455    MoSU005F_F05_BE494028Ld01P015F02F081F1_043.ab1   335 
  459  C MoSU005R_F05_BE494028Ld01P015F02F081R1_043.ab1   363 
  503    MoSU005F_F05_BE494028Ld01P015F02F081F1_043.ab1   383 
  515  C MoSU005R_F05_BE494028Ld01P015F02F081R1_043.ab1   307 
  539    MoSU005F_F05_BE494028Ld01P015F02F081F1_043.ab1   419 
  543  C MoSU005R_F05_BE494028Ld01P015F02F081R1_043.ab1   279 
  555    MoSU005F_F05_BE494028Ld01P015F02F081F1_043.ab1   435 
  559  C MoSU005R_F05_BE494028Ld01P015F02F081R1_043.ab1   263 
  691    MoSU005F_F05_BE494028Ld01P015F02F081F1_043.ab1   571 
  695  C MoSU005R_F05_BE494028Ld01P015F02F081R1_043.ab1   127 
  747    MoSU005F_F05_BE494028Ld01P015F02F081F1_043.ab1   627 
  751  C MoSU005R_F05_BE494028Ld01P015F02F081R1_043.ab1    71 
  795    MoSU005F_F05_BE494028Ld01P015F02F081F1_043.ab1   675 
  799  C MoSU005R_F05_BE494028Ld01P015F02F081R1_043.ab1    23 
  803    MoSU005F_F05_BE494028Ld01P015F02F081F1_043.ab1   683 
  811  C MoSU005R_F05_BE494028Ld01P015F02F081R1_043.ab1    11 
  815    MoSU005F_F05_BE494028Ld01P015F02F081F1_043.ab1   695 
Contig length: old 942, new 942

Contig length: old 942, new 942
New start: 0